RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRIM39-209ENST00000428728 RASEFQ8IZ41 740 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 MYOCDQ8IZQ8 938 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 GIMAP8Q8ND71 665 aaPredicted RBP19.59■□□□□ 0.73
TRIM39-209ENST00000428728 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 CDHR1Q96JP9 859 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 RBM28Q9NW13 759 aaKnown RBP19.59■□□□□ 0.73
TRIM39-209ENST00000428728 BRPF3Q9ULD4 1205 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 PCDHA6Q9UN73 950 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 PCDHA8Q9Y5H6 950 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 SPTBN5Q9NRC6 3674 aaKnown RBP19.58■□□□□ 0.73
TRIM39-209ENST00000428728 TRANK1O15050 2925 aa19.58■□□□□ 0.73
TRIM39-209ENST00000428728 GOLGA8AA7E2F4 631 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 GOLGA8BA8MQT2 603 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 ZBTB43O43298 467 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 MARK3P27448 753 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 NAPAP54920 295 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 TFF2Q03403 129 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 PLEKHG4Q58EX7 1191 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 PGBD1Q96JS3 809 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 RAD9AQ99638 391 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 OSBPL7Q9BZF2 842 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 EHMT1Q9H9B1 1298 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 NAP1L2Q9ULW6 460 aaPredicted RBP19.58■□□□□ 0.72
TRIM39-209ENST00000428728 UBIAD1Q9Y5Z9 338 aa19.58■□□□□ 0.72
TRIM39-209ENST00000428728 ATG2AQ2TAZ0 1938 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 WDR81Q562E7 1941 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 KLF18A0A0U1RQI7 1052 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 AMHP03971 560 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 POU3F3P20264 500 aaPredicted RBP19.57■□□□□ 0.72
TRIM39-209ENST00000428728 TYW1BQ6NUM6 668 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 DHX32Q7L7V1 743 aaKnown RBP19.57■□□□□ 0.72
TRIM39-209ENST00000428728 ADAMTS19Q8TE59 1207 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 SEPT8Q92599 483 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 MYH9P35579 1960 aaKnown RBP19.57■□□□□ 0.72
TRIM39-209ENST00000428728 TTC28Q96AY4 2481 aa19.57■□□□□ 0.72
TRIM39-209ENST00000428728 LINC01553A4QN01 128 aa19.56■□□□□ 0.72
TRIM39-209ENST00000428728 CAND2O75155 1236 aa19.56■□□□□ 0.72
TRIM39-209ENST00000428728 EXOSC10Q01780 885 aaKnown RBP19.56■□□□□ 0.72
TRIM39-209ENST00000428728 PPFIA1Q13136 1202 aa19.56■□□□□ 0.72
TRIM39-209ENST00000428728 JADE2Q9NQC1 790 aa19.56■□□□□ 0.72
TRIM39-209ENST00000428728 NRCAMQ92823 1304 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 GSTTP1A0A1W2PQM5 241 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 TNFRSF10AO00220 468 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 LPXNO60711 386 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 CPA1P15085 419 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 ADCY7P51828 1080 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 ADAM17P78536 824 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 FGD1P98174 961 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 FUT2Q10981 343 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
TRIM39-209ENST00000428728 KRT32Q14532 448 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 PPP1R18Q6NYC8 613 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 RUFY4Q6ZNE9 571 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 SEPT1Q8WYJ6 367 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 GLG1Q92896 1179 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 TGS1Q96RS0 853 aaKnown RBP19.55■□□□□ 0.72
TRIM39-209ENST00000428728 RIC8AQ9NPQ8 531 aa19.55■□□□□ 0.72
TRIM39-209ENST00000428728 EVPLQ92817 2033 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 KIAA1671Q9BY89 1806 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 STXBP3O00186 592 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 CDC27P30260 824 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 ERVK-21P61565 698 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 GRIK4Q16099 956 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 TSGA10IPQ3SY00 556 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 UHRF1Q96T88 793 aaPredicted RBP19.54■□□□□ 0.72
TRIM39-209ENST00000428728 ANO3Q9BYT9 981 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 JPH1Q9HDC5 661 aaPredicted RBP19.54■□□□□ 0.72
TRIM39-209ENST00000428728 ERAP1Q9NZ08 941 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 TUBE1Q9UJT0 475 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 INSL6Q9Y581 213 aa19.54■□□□□ 0.72
TRIM39-209ENST00000428728 V9GY48 417 aaPredicted RBP19.54■□□□□ 0.72
TRIM39-209ENST00000428728 UPP2O95045 317 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 KCNQ1P51787 676 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 IGBP1P78318 339 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 CYP2W1Q8TAV3 490 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 MXRA8Q9BRK3 442 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 C17orf80Q9BSJ5 609 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 IFIH1Q9BYX4 1025 aaKnown RBP19.53■□□□□ 0.72
TRIM39-209ENST00000428728 SMARCAD1Q9H4L7 1026 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 SUGCTQ9HAC7 445 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 KCNH7Q9NS40 1196 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 TMEM260Q9NX78 707 aa19.53■□□□□ 0.72
TRIM39-209ENST00000428728 COL4A6Q14031 1691 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 BRWD1Q9NSI6 2320 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 hCG_1984214I3L0E3 225 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 GHRP10912 638 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 APOBRQ0VD83 1088 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 FAM26DQ5JW98 314 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 ZNF713Q8N859 430 aaPredicted RBP19.52■□□□□ 0.72
TRIM39-209ENST00000428728 NECAB3Q96P71 396 aaPredicted RBP19.52■□□□□ 0.72
TRIM39-209ENST00000428728 YME1L1Q96TA2 773 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 FAM217BQ9NTX9 383 aaPredicted RBP19.52■□□□□ 0.72
TRIM39-209ENST00000428728 SLC9A2Q9UBY0 812 aa19.52■□□□□ 0.72
TRIM39-209ENST00000428728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-209ENST00000428728 SMCO2A6NFE2 343 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 MAFGO15525 162 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 CHRNA1P02708 482 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 HMGB1P09429 215 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms