RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-208	ENST00000427658	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PHKB	Q93100	1093 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	LRRC45	Q96CN5	670 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	VPS54	Q9P1Q0	977 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SALL4	Q9UJQ4	1053 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	FBXL5	Q9UKA1	691 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	CD2AP	Q9Y5K6	639 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ANKRD36C	Q5JPF3	1778 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	MYH7	P12883	1935 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658		E7ENQ6	273 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PRC1	O43663	620 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PLEK	P08567	350 aa	Predicted RBP	11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	GSTA2	P09210	222 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	FLT3	P36888	993 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	GJA8	P48165	433 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ERVK-9	P63128	1117 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RNASEL	Q05823	741 aa	Known RBP	11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	IRGC	Q6NXR0	463 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SESTD1	Q86VW0	696 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ANKRD13C	Q8N6S4	541 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	AZIN2	Q96A70	460 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	CCDC42	Q96M95	316 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	GSDMA	Q96QA5	445 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	IWS1	Q96ST2	819 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	IFIH1	Q9BYX4	1025 aa	Known RBP	11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	CSRNP2	Q9H175	543 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ISCU	Q9H1K1	167 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	DBNL	Q9UJU6	430 aa	Known RBP	11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PCDHA13	Q9Y5I0	950 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	GMEB1	Q9Y692	573 aa		11.42	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	MYH13	Q9UKX3	1938 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	MYH14	Q7Z406	1995 aa	Known RBP	11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SNX3	O60493	162 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SERPINB4	P48594	390 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	DNA2	P51530	1060 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	CCDC15	Q0P6D6	951 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	KCTD19	Q17RG1	926 aa	Predicted RBP	11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RRAGB	Q5VZM2	374 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	CC2D2B	Q6DHV5	1058 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	IRF2BP1	Q8IU81	584 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RNF10	Q8N5U6	811 aa	Known RBP	11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ZNF507	Q8TCN5	953 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	STK32A	Q8WU08	396 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	STAM	Q92783	540 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PTPRN2	Q92932	1015 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	TLCD1	Q96CP7	247 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	KAZALD1	Q96I82	304 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ATP8A2	Q9NTI2	1148 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SPATA7	Q9P0W8	599 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	AFDN	P55196	1824 aa	Known RBP	11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	BCOR	Q6W2J9	1755 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	UBE2Q2L	H0YL09	131 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PEX11A	O75192	247 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	CYP11B2	P19099	503 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RXRB	P28702	533 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PTDSS1	P48651	473 aa	Known RBP	11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	EPHA10	Q5JZY3	1008 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	KLHDC7A	Q5VTJ3	777 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	BICDL1	Q6ZP65	573 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SH3RF1	Q7Z6J0	888 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	C17orf50	Q8WW18	174 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	UTP4	Q969X6	686 aa	Known RBP	11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SLC4A9	Q96Q91	983 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	DDX23	Q9BUQ8	820 aa	Known RBP	11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	KRT23	Q9C075	422 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	NEUROG2	Q9H2A3	272 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	VCX3B	Q9H321	246 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	THAP9	Q9H5L6	903 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	VCX3A	Q9NNX9	186 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RWDD2A	Q9UIY3	292 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PALLD	Q8WX93	1383 aa		11.41	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	hCG_2014768	A0A024R1R8	64 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658		A0A1W2PQC6	194 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	KLK7	P49862	253 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	HAND2	P61296	217 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	TSNAXIP1	Q2TAA8	658 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RASIP1	Q5U651	963 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	KLHL7	Q8IXQ5	586 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	TMTC2	Q8N394	836 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ZNF579	Q8NAF0	562 aa	Known RBP	11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ASAP3	Q8TDY4	903 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	EPSTI1	Q96J88	318 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	PRMT1	Q99873	361 aa	Known RBP	11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	ABCC12	Q96J65	1359 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658		A0A0G2JS52	829 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	LGALS16	A8MUM7	142 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	BTBD18	B2RXH4	712 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	HNRNPR	O43390	633 aa	Known RBP	11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	KCNQ2	O43526	872 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	GFPT2	O94808	682 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	GNA14	O95837	355 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	VIL1	P09327	827 aa	Known RBP	11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	SPATA31D3	P0C874	917 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	GM2A	P17900	193 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	TRIM21	P19474	475 aa	Known RBP	11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RXRA	P19793	462 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	CACNA2D1	P54289	1103 aa		11.4	□□□□□ -0.58
AFG3L1P-208	ENST00000427658	RASSF7	Q02833	373 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms