RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SNX2O60749 519 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 GDF11O95390 407 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 HOXB7P09629 217 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 MRPL28Q13084 256 aaKnown RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 NEK8Q86SG6 692 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 BLIDQ8IZY5 108 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 OR6B3Q8NGW1 331 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PGBD4Q96DM1 585 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 KANSL2Q9H9L4 492 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 RAPGEF6Q8TEU7 1601 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 CPP00450 1065 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 GYG1P46976 350 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 MYL5Q02045 173 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 FBXW10Q5XX13 1052 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 OR6B2Q6IFH4 312 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 RNF207Q6ZRF8 634 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 TMCO5AQ8N6Q1 288 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 IGSF22Q8N9C0 903 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 FAM71BQ8TC56 605 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 ACAP3Q96P50 834 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 TMEM206Q9H813 350 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 ZSCAN32Q9NX65 697 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 EHD2Q9NZN4 543 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 ESPNB1AK53 854 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SGK1O00141 431 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 ATF2P15336 505 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 ZAP70P43403 619 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 CAPZA2P47755 286 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 NSUN2Q08J23 767 aaKnown RBP eCLIP6.18□□□□□ -1.42
HERC4-206ENST00000427635 CUL1Q13616 776 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SNX17Q15036 470 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 OR6J1Q8NGC5 347 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 GTF3C2Q8WUA4 911 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 PDCD6IPQ8WUM4 868 aaKnown RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 CCDC127Q96BQ5 260 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 CCDC138Q96M89 665 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 STX18Q9P2W9 335 aaKnown RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 KLF15Q9UIH9 416 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 MAPK8IP1Q9UQF2 711 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SYCP2Q9BX26 1530 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 MCF2LO15068 1137 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 HUS1O60921 280 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SMIM24O75264 130 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 PAPOLAP51003 745 aaKnown RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 RASGRF1Q13972 1273 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 KCTD6Q8NC69 237 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 FOPNLQ96NB1 174 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 LRRC37BQ96QE4 947 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 WRNIP1Q96S55 665 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 NAPGQ99747 312 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 ARPC5LQ9BPX5 153 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 GCOM2Q9BZD3 368 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 AKAP7Q9P0M2 348 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 TLK1Q9UKI8 766 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 IPPQ9Y573 584 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 ASXL1Q8IXJ9 1541 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 ASB14A6NK59 587 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 USP17L12C9JPN9 530 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 KLRF2D3W0D1 207 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 USP17L21D6R901 530 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 TRAPPC3O43617 180 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 PRPSAP2O60256 369 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SLFN12LQ6IEE8 588 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 CCDC84Q86UT8 332 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 C17orf50Q8WW18 174 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 RABGGTAQ92696 567 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 DCUN1D1Q96GG9 259 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 IFIH1Q9BYX4 1025 aaKnown RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 DACT1Q9NYF0 836 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SERTAD1Q9UHV2 236 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 USP17L5A8MUK1 530 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 RHOXF2BP0C7M4 288 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 MSL3P1P0C860 447 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 PDE1BQ01064 536 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 IMPG1Q17R60 797 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 C10orf62Q5T681 223 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 CHPFQ8IZ52 775 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SPDL1Q96EA4 605 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SENP7Q9BQF6 1050 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 RHOXF2Q9BQY4 288 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 COA1Q9GZY4 146 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 SENP1Q9P0U3 644 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 IFNKQ9P0W0 207 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 MAGED2Q9UNF1 606 aaPredicted RBP6.18□□□□□ -1.42
HERC4-206ENST00000427635 ABCA10Q8WWZ4 1543 aa6.18□□□□□ -1.42
HERC4-206ENST00000427635 TRIM64CA6NLI5 447 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 MYO1DO94832 1006 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 MMP10P09238 476 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 OR52Z1P0C646 297 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ZNF75DP51815 510 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 OSTNP61366 133 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 TMEM259Q4ZIN3 620 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 TRIM48Q8IWZ4 208 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 DIS3L2Q8IYB7 885 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 SKA1Q96BD8 255 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms