RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 PPP6R3Q5H9R7 873 aaPredicted RBP14.26□□□□□ -0.13
SPG11-202ENST00000427534 ERLEC1Q96DZ1 483 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 FGD4Q96M96 766 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 CREB3O43889 395 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 PHBP35232 272 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 SERPINB6P35237 376 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 ZKSCAN8Q15776 578 aaPredicted RBP14.26□□□□□ -0.13
SPG11-202ENST00000427534 GOLGA8MH3BSY2 632 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 PRDX5P30044 214 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 PDZD4Q76G19 769 aaPredicted RBP14.26□□□□□ -0.13
SPG11-202ENST00000427534 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 STAT3P40763 770 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 NME3Q13232 169 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 NACC1Q96RE7 527 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 SLC12A6Q9UHW9 1150 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 NRBP1Q9UHY1 535 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 MYO5CQ9NQX4 1742 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 GRAPQ13588 217 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 RASGRF1Q13972 1273 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 GRAPLQ8TC17 118 aaPredicted RBP14.26□□□□□ -0.13
SPG11-202ENST00000427534 GPT2Q8TD30 523 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 IPO11Q9UI26 975 aaKnown RBP14.26□□□□□ -0.13
SPG11-202ENST00000427534 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L15C9J2P7 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L13C9JLJ4 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L11C9JVI0 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L18D6R9N7 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L22D6RA61 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L17D6RBQ6 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L19D6RCP7 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L20D6RJB6 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 PSMC2P35998 433 aaKnown RBP14.25□□□□□ -0.13
SPG11-202ENST00000427534 GUCY2DQ02846 1103 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L24Q0WX57 530 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
SPG11-202ENST00000427534 ASPRV1Q53RT3 343 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 ACBD5Q5T8D3 534 aaPredicted RBP14.25□□□□□ -0.13
SPG11-202ENST00000427534 RNF219Q5W0B1 726 aaPredicted RBP14.25□□□□□ -0.13
SPG11-202ENST00000427534 USP17L6PQ6QN14 398 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 MMP19Q99542 508 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 YIPF2Q9BWQ6 316 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 VCX3BQ9H321 246 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 RBL2Q08999 1139 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 SPP2Q13103 211 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 PPP2R5EQ16537 467 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 ADD2P35612 726 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 IL6STP40189 918 aaPredicted RBP14.25□□□□□ -0.13
SPG11-202ENST00000427534 SEPT2Q15019 361 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 BAIAP2L1Q9UHR4 511 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 CYP27A1Q02318 531 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 MYRIPQ8NFW9 859 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 AP1M1Q9BXS5 423 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 MIS12Q9H081 205 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 RAB17Q9H0T7 212 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 KANSL2Q9H9L4 492 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 PRR36Q9H6K5 1346 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 AGRPO00253 132 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 SMIM24O75264 130 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 C10orf76Q5T2E6 689 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 ARHGEF18Q6ZSZ5 1173 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 SLC7A5P2Q9GIP4 190 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 INTUQ9ULD6 942 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 TOM1L1O75674 476 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 CPP00450 1065 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 IRF1P10914 325 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.25□□□□□ -0.13
SPG11-202ENST00000427534 CABS1Q96KC9 395 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 HPS4Q9NQG7 708 aa14.25□□□□□ -0.13
SPG11-202ENST00000427534 ADORA2BP29275 332 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 CACNA2D3Q8IZS8 1091 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 IQCDQ96DY2 449 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 CCDC51Q96ER9 411 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 TUBGCP2Q9BSJ2 902 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 SPTLC3Q9NUV7 552 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 PCDHB6Q9Y5E3 794 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 NPHP4O75161 1426 aaPredicted RBP14.24□□□□□ -0.13
SPG11-202ENST00000427534 KRT3P12035 628 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 RTKN2Q8IZC4 609 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 MYO1FO00160 1098 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 CYP21A2P08686 494 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 MYO1EQ12965 1108 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 CEP128Q6ZU80 1094 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 ELMOD1Q8N336 334 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 OR8K1Q8NGG5 319 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 CACTINQ8WUQ7 758 aaKnown RBP14.24□□□□□ -0.13
SPG11-202ENST00000427534 TTC25Q96NG3 672 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
SPG11-202ENST00000427534 XPOTO43592 962 aaKnown RBP14.24□□□□□ -0.13
SPG11-202ENST00000427534 BBOX1O75936 387 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 LMNB1P20700 586 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 GPSM2P81274 684 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 PLCG1P19174 1290 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 SLC7A5Q01650 507 aa14.24□□□□□ -0.13
SPG11-202ENST00000427534 AFPP02771 609 aaKnown RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 POLR2BP30876 1174 aaKnown RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 GALNT17Q6IS24 598 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 DEPDC1BQ8WUY9 529 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms