RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 CALM1P0DP23 149 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CALM2P0DP24 149 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CALM3P0DP25 149 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ATP2B1P20020 1258 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 SFPQP23246 707 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 MPSTP25325 297 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 EPHX2P34913 555 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 PLCD1P51178 756 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 UBASH3AP57075 661 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TPM4P67936 248 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ATP2C1P98194 919 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 GOLGA8FQ08AF8 430 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 GOLGA8DPQ0D2H9 430 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CHAF1AQ13111 956 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 GRAPQ13588 217 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CUL4BQ13620 913 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 GRM4Q14833 912 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 NFIXQ14938 502 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 IL17AQ16552 155 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 PTPN21Q16825 1174 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TPD52L1Q16890 204 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 PLA2G4EQ3MJ16 856 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CAVIN4Q5BKX8 364 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 FAM47AQ5JRC9 791 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TTC38Q5R3I4 469 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 IFIT1BQ5T764 474 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 C12orf60Q5U649 245 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 IER5Q5VY09 327 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CEP135Q66GS9 1140 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TMED8Q6PL24 325 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 OLFM4Q6UX06 510 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 C20orf204Q6ZNR8 217 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 C15orf52Q6ZUT6 534 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 MTERF4Q7Z6M4 381 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 RAB44Q7Z6P3 723 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CATIPQ7Z7H3 387 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 NBPF5PQ86XG9 351 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ETFBKMTQ8IXQ9 262 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 C4orf32Q8N8J7 132 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TRIML1Q8N9V2 468 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 MLKLQ8NB16 471 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 LRRN4CLQ8ND94 238 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 SPATA20Q8TB22 786 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 GRAPLQ8TC17 118 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ENOX1Q8TC92 643 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 HELQQ8TDG4 1101 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 UBE2Q2Q8WVN8 375 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TRIM11Q96F44 468 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 DYNLL2Q96FJ2 89 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 PAGE5Q96GU1 130 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 EPSTI1Q96J88 318 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 PPP1R13BQ96KQ4 1090 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 SETDB2Q96T68 719 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 NOL10Q9BSC4 688 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CRNKL1Q9BZJ0 848 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 GSX2Q9BZM3 304 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TMX1Q9H3N1 280 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 NEUROD4Q9HD90 331 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 IL17RBQ9NRM6 502 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ATP8A2Q9NTI2 1148 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 FANCLQ9NW38 375 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TRMT1Q9NXH9 659 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ARPP21Q9UBL0 812 aaPredicted RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 MKL2Q9ULH7 1088 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 CEP131Q9UPN4 1083 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 JAG2Q9Y219 1238 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 LEMD3Q9Y2U8 911 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 RTCBQ9Y3I0 505 aaKnown RBP3.1□□□□□ -1.91
LINC00407-201ENST00000426509 NFE2L3Q9Y4A8 694 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 PAXBP1Q9Y5B6 917 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 XDHP47989 1333 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ADAMTSL1Q8N6G6 1762 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 SBF1O95248 1867 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 CCDC88AQ3V6T2 1871 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 CDK5RAP2Q96SN8 1893 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 ELOA3CA0A087WX78 387 aaPredicted RBP3.09□□□□□ -1.91
LINC00407-201ENST00000426509 VWA3AA6NCI4 1184 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 SOWAHDA6NJG2 315 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 ELOA3DA6NLF2 546 aaPredicted RBP3.09□□□□□ -1.91
LINC00407-201ENST00000426509 TGFBR3LH3BV60 316 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 KIF2AO00139 706 aaPredicted RBP3.09□□□□□ -1.91
LINC00407-201ENST00000426509 ZBTB39O15060 712 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 CBFA2T2O43439 604 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 CYTH3O43739 400 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 ICMTO60725 284 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 IGSF3O75054 1194 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 BMP15O95972 392 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 PROCP04070 461 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 SLFN14P0C7P3 912 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 TOP1P11387 765 aaKnown RBP3.09□□□□□ -1.91
LINC00407-201ENST00000426509 SCG2P13521 617 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 ERCC5P28715 1186 aaPredicted RBP3.09□□□□□ -1.91
LINC00407-201ENST00000426509 CASP1P29466 404 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 INPP5BP32019 993 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 RFC4P35249 363 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 MAP2K2P36507 400 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 PBX1P40424 430 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 AFMP43652 599 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 TRAPPC10P48553 1259 aa3.09□□□□□ -1.91
LINC00407-201ENST00000426509 GPSM2P81274 684 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms