RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 ICAM3P32942 547 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 USP11P51784 963 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 FOXC1Q12948 553 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SEMA3FQ13275 785 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 NONOQ15233 471 aaKnown RBP eCLIP8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CSPP1Q1MSJ5 1256 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SLC9C1Q4G0N8 1177 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 TMEM63BQ5T3F8 832 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CCDC62Q6P9F0 684 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 KRT25Q7Z3Z0 450 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 RETREG3Q86VR2 466 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CYP2W1Q8TAV3 490 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 TBCKQ8TEA7 893 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 ZNF333Q96JL9 665 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MBOAT7Q96N66 472 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 VTA1Q9NP79 307 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 PDGFCQ9NRA1 345 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 LRRC37A2A6NM11 1700 aa8.05□□□□□ -1.12
CHCHD3P1-201ENST00000425516 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SPATA31C2B4DYI2 1134 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CFAP99D6REC4 459 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 FAM86B1E9PN63 330 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MEIS1O00470 390 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 WNT7AO00755 349 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 ADCY6O43306 1168 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 STX6O43752 255 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 ARIH2O95376 493 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CCND3P30281 292 aaPredicted RBP8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 TOB1P50616 345 aaPredicted RBP8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MTFR1Q15390 333 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SAFBQ15424 915 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 QPCTQ16769 361 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 INF2Q27J81 1249 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CEP55Q53EZ4 464 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 IQSEC1Q6DN90 963 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MOXD1Q6UVY6 613 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 PIK3AP1Q6ZUJ8 805 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 EEPD1Q7L9B9 569 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 NIPA1Q7RTP0 329 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 NOSTRINQ8IVI9 506 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 FBXO16Q8IX29 292 aaPredicted RBP8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 LENG9Q96B70 501 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MXRA8Q9BRK3 442 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 BRMS1Q9HCU9 246 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 PAK6Q9NQU5 681 aaPredicted RBP8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 RTEL1Q9NZ71 1219 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 ZDHHC9Q9Y397 364 aa8.04□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MCM3APO60318 1980 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CCDC194A0A1B0GVG4 234 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 H3BQV1 296 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SPTLC1O15269 473 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MAFGO15525 162 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SEPT4O43236 478 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 HSP90AA1P07900 732 aaKnown RBP8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 ARP10275 920 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 TGFB3P10600 412 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CCL5P13501 91 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 ANP32AP39687 249 aaKnown RBP8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 ADCYAP1R1P41586 468 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 NKX3-2P78367 333 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SKOR1P84550 965 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 SP2Q02086 613 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 RESTQ13127 1097 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 PKP1Q13835 747 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CCDC144BQ3MJ40 725 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 PPP4R3AQ6IN85 833 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 GPRASP2Q96D09 838 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MPHOSPH6Q99547 160 aaKnown RBP8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 WDR11Q9BZH6 1224 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 UNC93B1Q9H1C4 597 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 BCAS3Q9H6U6 928 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 JADE2Q9NQC1 790 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 DDX41Q9UJV9 622 aaKnown RBP8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 FAM184BQ9ULE4 1060 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 GNEQ9Y223 722 aaKnown RBP8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 CNPY2Q9Y2B0 182 aa8.03□□□□□ -1.12
CHCHD3P1-201ENST00000425516 MYH7BA7E2Y1 1941 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 VPS37CA5D8V6 355 aaPredicted RBP8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CTAGE5O15320 804 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DHX15O43143 795 aaKnown RBP8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FIBPO43427 364 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ATP9AO75110 1047 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TDP2O95551 362 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 BRD1O95696 1058 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KCNA2P16389 499 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SMPD1P17405 629 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PTGS1P23219 599 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 RPIAP49247 311 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TNFAIP2Q03169 654 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LY6KQ17RY6 165 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 Q4G0T1 1027 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DUSP28Q4G0W2 176 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GJC2Q5T442 439 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms