RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 PRR16Q569H4 304 aa25.38■■□□□ 1.65
PTCHD3P2-201ENST00000424937 UIMC1Q96RL1 719 aa25.38■■□□□ 1.65
PTCHD3P2-201ENST00000424937 CIITAP33076 1130 aa25.37■■□□□ 1.65
PTCHD3P2-201ENST00000424937 SHHQ15465 462 aa25.37■■□□□ 1.65
PTCHD3P2-201ENST00000424937 ZSCAN31Q96LW9 406 aaPredicted RBP25.37■■□□□ 1.65
PTCHD3P2-201ENST00000424937 CTAGE1Q96RT6 745 aa25.37■■□□□ 1.65
PTCHD3P2-201ENST00000424937 SMIM10L2AP0DMW4 78 aa25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 SMIM10L2BP0DMW5 78 aa25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 FOSBP53539 338 aa25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 NONOQ15233 471 aaKnown RBP eCLIP25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 KRT25Q7Z3Z0 450 aa25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 SCLYQ96I15 445 aa25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 TBC1D32Q96NH3 1257 aa25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 ZNF577Q9BSK1 485 aa25.36■■□□□ 1.65
PTCHD3P2-201ENST00000424937 IPO5O00410 1097 aaKnown RBP25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 SOX1O00570 391 aaPredicted RBP25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 ST18O60284 1047 aa25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 USP11P51784 963 aa25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 ACTR2P61160 394 aa25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 ZNF200P98182 395 aaPredicted RBP25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 CCDC155Q8N6L0 562 aa25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 GLG1Q92896 1179 aa25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 SH2B1Q9NRF2 756 aaPredicted RBP25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 EMSYQ7Z589 1322 aa25.35■■□□□ 1.65
PTCHD3P2-201ENST00000424937 CCDC194A0A1B0GVG4 234 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 C17orf102A2RUQ5 167 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 PITPNM1O00562 1244 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 EDIL3O43854 480 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 ACRP10323 421 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 MARK3P27448 753 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 BFSP2Q13515 415 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 HIC1Q14526 733 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 LRIT3Q3SXY7 679 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 RETREG2Q8NC44 543 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 OXER1Q8TDS5 423 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 DHX38Q92620 1227 aaKnown RBP25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 LENG9Q96B70 501 aa25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 RNPC3Q96LT9 517 aaKnown RBP25.34■■□□□ 1.65
PTCHD3P2-201ENST00000424937 LAMA3Q16787 3333 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 INF2Q27J81 1249 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 CAGE1Q8TC20 777 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 SMARCAD1Q9H4L7 1026 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 AZI2Q9H6S1 392 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 BRMS1Q9HCU9 246 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 IL23AQ9NPF7 189 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 ERAP1Q9NZ08 941 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 TCEAL9Q9UHQ7 104 aa25.33■■□□□ 1.65
PTCHD3P2-201ENST00000424937 TET1Q8NFU7 2136 aa25.33■■□□□ 1.64
PTCHD3P2-201ENST00000424937 LGR5O75473 907 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TDP2O95551 362 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 CCNE2O96020 404 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 KRT2P35908 639 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 PTK7Q13308 1070 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TRIM29Q14134 588 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 PSRC1Q6PGN9 363 aaPredicted RBP25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 ATP6V0A1Q93050 837 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 LRCH3Q96II8 777 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 PCYT2Q99447 389 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 LLPHQ9BRT6 129 aaKnown RBP25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 RNPEPQ9H4A4 650 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TBC1D22BQ9NU19 505 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 SETD4Q9NVD3 440 aa25.32■■□□□ 1.64
PTCHD3P2-201ENST00000424937 DHX15O43143 795 aaKnown RBP25.31■■□□□ 1.64
PTCHD3P2-201ENST00000424937 HOXC8P31273 242 aa25.31■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TMEM240Q5SV17 173 aa25.31■■□□□ 1.64
PTCHD3P2-201ENST00000424937 PIK3AP1Q6ZUJ8 805 aa25.31■■□□□ 1.64
PTCHD3P2-201ENST00000424937 C16orf59Q7L2K0 433 aa25.31■■□□□ 1.64
PTCHD3P2-201ENST00000424937 WNT8BQ93098 351 aa25.31■■□□□ 1.64
PTCHD3P2-201ENST00000424937 MSH4O15457 936 aa25.3■■□□□ 1.64
PTCHD3P2-201ENST00000424937 NR5A1Q13285 461 aa25.3■■□□□ 1.64
PTCHD3P2-201ENST00000424937 ZNF365Q70YC5 407 aa25.3■■□□□ 1.64
PTCHD3P2-201ENST00000424937 AFAP1L1Q8TED9 768 aa25.3■■□□□ 1.64
PTCHD3P2-201ENST00000424937 LMBR1Q8WVP7 490 aa25.3■■□□□ 1.64
PTCHD3P2-201ENST00000424937 GBF1Q92538 1859 aa25.3■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TREHO43280 583 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 MMP1P03956 469 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 IQCF3P0C7M6 154 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 GNAT1P11488 350 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 RBL2Q08999 1139 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 PPFIA1Q13136 1202 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 LETM2Q2VYF4 491 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 Q4G0T1 1027 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 MOXD1Q6UVY6 613 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 DEFB128Q7Z7B8 93 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 NEK8Q86SG6 692 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 SERINC5Q86VE9 423 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 BACH2Q9BYV9 841 aa25.29■■□□□ 1.64
PTCHD3P2-201ENST00000424937 BACH1O14867 736 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 ATG7O95352 703 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 CD2BP2O95400 341 aaKnown RBP25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 CKBP12277 381 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 SELPP16109 830 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 STAT5BP51692 787 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 KRT76Q01546 638 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TRIM71Q2Q1W2 868 aaKnown RBP25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 KRT40Q6A162 431 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 ZNF746Q6NUN9 644 aaPredicted RBP25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 ABHD15Q6UXT9 468 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 LRRC8DQ7L1W4 858 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms