RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 C6orf50Q9HD87 102 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 TXNRD2Q9NNW7 524 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 RNF146Q9NTX7 359 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 CPA4Q9UI42 421 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 CASP8AP2Q9UKL3 1982 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 SLC15A5A6NIM6 579 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 STXBP3O00186 592 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 TNPO2O14787 897 aaKnown RBP8.04□□□□□ -1.12
EPHA4-206ENST00000424339 CTCFP49711 727 aaPredicted RBP8.04□□□□□ -1.12
EPHA4-206ENST00000424339 ADCY7P51828 1080 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 ST3GAL1Q11201 340 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 AP3B2Q13367 1082 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 PKN1Q16512 942 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 USH1GQ495M9 461 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 WWC2Q6AWC2 1192 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 PLEKHH3Q7Z736 793 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 MSL3Q8N5Y2 521 aaKnown RBP8.04□□□□□ -1.12
EPHA4-206ENST00000424339 KDF1Q8NAX2 398 aaPredicted RBP8.04□□□□□ -1.12
EPHA4-206ENST00000424339 DAGLBQ8NCG7 672 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 DNERQ8NFT8 737 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 C8orf76Q96K31 380 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 ALG1Q9BT22 464 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 RIC8AQ9NPQ8 531 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 ADD3Q9UEY8 706 aaKnown RBP8.04□□□□□ -1.12
EPHA4-206ENST00000424339 DIS3Q9Y2L1 958 aaKnown RBP8.04□□□□□ -1.12
EPHA4-206ENST00000424339 DYRK1BQ9Y463 629 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 MGAMO43451 1857 aa8.04□□□□□ -1.12
EPHA4-206ENST00000424339 SMCO2A6NFE2 343 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 GCOM1H8Y6P7 765 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-206ENST00000424339 JAK2O60674 1132 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 PPP1R11O60927 126 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-206ENST00000424339 LILRA1O75019 489 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 TBC1D8O95759 1140 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 HOXC6P09630 235 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 POLR2MP0CAP2 368 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 XRCC5P13010 732 aaKnown RBP8.03□□□□□ -1.12
EPHA4-206ENST00000424339 FDPSP14324 419 aaKnown RBP8.03□□□□□ -1.12
EPHA4-206ENST00000424339 GJB2P29033 226 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 HSD17B4P51659 736 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 NLRP5P59047 1200 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 IRF5Q13568 498 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 GRB14Q14449 540 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 RNF207Q6ZRF8 634 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 GPR142Q7Z601 462 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
EPHA4-206ENST00000424339 ANKRD35Q8N283 1001 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 FBXO18Q8NFZ0 1043 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 CLEC4DQ8WXI8 215 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 DDX11Q96FC9 970 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 MMP19Q99542 508 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 PHF20Q9BVI0 1012 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 OXCT2Q9BYC2 517 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-206ENST00000424339 PORCNQ9H237 461 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 A1CFQ9NQ94 594 aaKnown RBP8.03□□□□□ -1.12
EPHA4-206ENST00000424339 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 RIPK3Q9Y572 518 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 PLXNB2O15031 1838 aa8.03□□□□□ -1.12
EPHA4-206ENST00000424339 DNAJC25-GNG10A0A024R161 153 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 SPDYE3A6NKU9 549 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 H3BQV1 296 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 NFIBO00712 420 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 STAM2O75886 525 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 CFBP00751 764 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 MMP1P03956 469 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 RGS2P41220 211 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 PSMC4P43686 418 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 SNAP25P60880 206 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 RPS6P62753 249 aaKnown RBP8.02□□□□□ -1.13
EPHA4-206ENST00000424339 WDR78Q5VTH9 848 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 LARP1BQ659C4 914 aaKnown RBP8.02□□□□□ -1.13
EPHA4-206ENST00000424339 XRRA1Q6P2D8 792 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 NSMFQ6X4W1 530 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 KRT25Q7Z3Z0 450 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 ADAM32Q8TC27 787 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 PIBF1Q8WXW3 757 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 IWS1Q96ST2 819 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 NAP1L4Q99733 375 aaKnown RBP8.02□□□□□ -1.13
EPHA4-206ENST00000424339 APBA2Q99767 749 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 FOXP1Q9H334 677 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-206ENST00000424339 EFCC1Q9HA90 598 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 CYP39A1Q9NYL5 469 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 SMCHD1A6NHR9 2005 aa8.02□□□□□ -1.13
EPHA4-206ENST00000424339 ZNFX1Q9P2E3 1918 aaKnown RBP8.01□□□□□ -1.13
EPHA4-206ENST00000424339 hCG_1642624A0A1W2PR95 340 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 ASB14A6NK59 587 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 MEN1O00255 615 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 MEIS2O14770 477 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 OPLAHO14841 1288 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 HSPA1AP0DMV8 641 aaKnown RBP8.01□□□□□ -1.13
EPHA4-206ENST00000424339 HSPA1BP0DMV9 641 aaKnown RBP8.01□□□□□ -1.13
EPHA4-206ENST00000424339 ADORA2AP29274 412 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 KRT2P35908 639 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 MAP2K3P46734 347 aa8.01□□□□□ -1.13
EPHA4-206ENST00000424339 CLK2P49760 499 aaKnown RBP8.01□□□□□ -1.13
EPHA4-206ENST00000424339 GNL2Q13823 731 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms