RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PSRC1Q6PGN9 363 aaPredicted RBP30.02■■■□□ 2.4
CDK9-202ENST00000421939 C16orf59Q7L2K0 433 aa30.02■■■□□ 2.4
CDK9-202ENST00000421939 NSUN7Q8NE18 718 aaKnown RBP30.02■■■□□ 2.4
CDK9-202ENST00000421939 CAGE1Q8TC20 777 aa30.02■■■□□ 2.4
CDK9-202ENST00000421939 SCLYQ96I15 445 aa30.02■■■□□ 2.4
CDK9-202ENST00000421939 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.02■■■□□ 2.47e-7■■■□□ 18
CDK9-202ENST00000421939 PHF20Q9BVI0 1012 aa30.02■■■□□ 2.4
CDK9-202ENST00000421939 ACRP10323 421 aa30.01■■■□□ 2.39
CDK9-202ENST00000421939 TMEM240Q5SV17 173 aa30.01■■■□□ 2.39
CDK9-202ENST00000421939 RETREG2Q8NC44 543 aa30.01■■■□□ 2.39
CDK9-202ENST00000421939 DHX38Q92620 1227 aaKnown RBP30.01■■■□□ 2.39
CDK9-202ENST00000421939 EMSYQ7Z589 1322 aa30■■■□□ 2.39
CDK9-202ENST00000421939 C17orf102A2RUQ5 167 aa30■■■□□ 2.39
CDK9-202ENST00000421939 SLC34A2O95436 690 aa30■■■□□ 2.39
CDK9-202ENST00000421939 FDPSP14324 419 aaKnown RBP30■■■□□ 2.39
CDK9-202ENST00000421939 HOXC8P31273 242 aa30■■■□□ 2.39
CDK9-202ENST00000421939 ACTR2P61160 394 aa30■■■□□ 2.39
CDK9-202ENST00000421939 ZNF200P98182 395 aaPredicted RBP30■■■□□ 2.39
CDK9-202ENST00000421939 ST3GAL1Q11201 340 aa30■■■□□ 2.39
CDK9-202ENST00000421939 PTK7Q13308 1070 aa30■■■□□ 2.39
CDK9-202ENST00000421939 HIC1Q14526 733 aa30■■■□□ 2.39
CDK9-202ENST00000421939 PRR16Q569H4 304 aa30■■■□□ 2.39
CDK9-202ENST00000421939 TBCKQ8TEA7 893 aa30■■■□□ 2.39
CDK9-202ENST00000421939 IPO5O00410 1097 aaKnown RBP29.99■■■□□ 2.39
CDK9-202ENST00000421939 USP11P51784 963 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 RBL2Q08999 1139 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 AFAP1L1Q8TED9 768 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 GLG1Q92896 1179 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 LENG9Q96B70 501 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 ZNF577Q9BSK1 485 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 SMARCAD1Q9H4L7 1026 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 GJB4Q9NTQ9 266 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 ERAP1Q9NZ08 941 aa29.99■■■□□ 2.39
CDK9-202ENST00000421939 DDX39AO00148 427 aaKnown RBP29.98■■■□□ 2.39
CDK9-202ENST00000421939 EDIL3O43854 480 aa29.98■■■□□ 2.39
CDK9-202ENST00000421939 JAK2O60674 1132 aa29.98■■■□□ 2.39
CDK9-202ENST00000421939 ZNF365Q70YC5 407 aa29.98■■■□□ 2.39
CDK9-202ENST00000421939 KRT25Q7Z3Z0 450 aa29.98■■■□□ 2.39
CDK9-202ENST00000421939 RPUSD2Q8IZ73 545 aaKnown RBP29.98■■■□□ 2.39
CDK9-202ENST00000421939 ATP6V0A1Q93050 837 aa29.98■■■□□ 2.39
CDK9-202ENST00000421939 LGR5O75473 907 aa29.97■■■□□ 2.39
CDK9-202ENST00000421939 IQCF3P0C7M6 154 aa29.97■■■□□ 2.39
CDK9-202ENST00000421939 RFC2P35250 354 aa29.97■■■□□ 2.39
CDK9-202ENST00000421939 NONOQ15233 471 aaKnown RBP eCLIP29.97■■■□□ 2.39
CDK9-202ENST00000421939 RABEP1Q15276 862 aa29.97■■■□□ 2.39
CDK9-202ENST00000421939 SERINC5Q86VE9 423 aa29.97■■■□□ 2.39
CDK9-202ENST00000421939 UIMC1Q96RL1 719 aa29.97■■■□□ 2.39
CDK9-202ENST00000421939 RNPEPQ9H4A4 650 aa29.97■■■□□ 2.39
CDK9-202ENST00000421939 TRIP12Q14669 1992 aaPredicted RBP29.97■■■□□ 2.39
CDK9-202ENST00000421939 DHX15O43143 795 aaKnown RBP29.96■■■□□ 2.39
CDK9-202ENST00000421939 CCNE2O96020 404 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 PFKMP08237 780 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 GNAT1P11488 350 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 MARK3P27448 753 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 TRIM71Q2Q1W2 868 aaKnown RBP29.96■■■□□ 2.39
CDK9-202ENST00000421939 WNT8BQ93098 351 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 PCYT2Q99447 389 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 AZI2Q9H6S1 392 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 TBC1D22BQ9NU19 505 aa29.96■■■□□ 2.39
CDK9-202ENST00000421939 SCN5AQ14524 2016 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 CKBP12277 381 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 SELPP16109 830 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 GPR153Q6NV75 609 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 LRRC8DQ7L1W4 858 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 CCDC83Q8IWF9 413 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 LMBR1Q8WVP7 490 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 VWCEQ96DN2 955 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 ZSCAN31Q96LW9 406 aaPredicted RBP29.95■■■□□ 2.39
CDK9-202ENST00000421939 SETD4Q9NVD3 440 aa29.95■■■□□ 2.39
CDK9-202ENST00000421939 CCDC194A0A1B0GVG4 234 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 TREHO43280 583 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 ATG7O95352 703 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 FGBP02675 491 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 RASIP1Q5U651 963 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 DEFB128Q7Z7B8 93 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 HERVK_113Q902F9 699 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 MTIF3Q9H2K0 278 aaKnown RBP29.94■■■□□ 2.38
CDK9-202ENST00000421939 SH2B1Q9NRF2 756 aaPredicted RBP29.94■■■□□ 2.38
CDK9-202ENST00000421939 TCEAL9Q9UHQ7 104 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 NRCAMQ92823 1304 aa29.94■■■□□ 2.38
CDK9-202ENST00000421939 PPFIA1Q13136 1202 aa29.93■■■□□ 2.38
CDK9-202ENST00000421939 INF2Q27J81 1249 aa29.93■■■□□ 2.38
CDK9-202ENST00000421939 CYP3A7-CYP3A51PA0A087WV96 503 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 TDP2O95551 362 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 CYP3A7P24462 503 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 ADAM17P78536 824 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 SMAD3P84022 425 aaKnown RBP29.92■■■□□ 2.38
CDK9-202ENST00000421939 ZNF746Q6NUN9 644 aaPredicted RBP29.92■■■□□ 2.38
CDK9-202ENST00000421939 MOXD1Q6UVY6 613 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 ABHD15Q6UXT9 468 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 PLPPR4Q7Z2D5 763 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 OXER1Q8TDS5 423 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 BRMS1Q9HCU9 246 aa29.92■■■□□ 2.38
CDK9-202ENST00000421939 MSH4O15457 936 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 KRT2P35908 639 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 STAT5BP51692 787 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 KRT76Q01546 638 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 GRIK4Q16099 956 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 Q4G0T1 1027 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 MIS18BP1Q6P0N0 1132 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms