RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 CMTR1Q8N1G2 835 aaKnown RBP14.89□□□□□ -0.03
LINC00339-203ENST00000420503 LINC01599Q8WXQ3 324 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 CLDND1Q9NY35 253 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 TECTAO75443 2155 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 hCG_1642624A0A1W2PR95 340 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 LINC01565O15544 149 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 CTNNB1P35222 781 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 ZP2Q05996 745 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 LPIN1Q14693 890 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 COL19A1Q14993 1142 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 TIGD5Q53EQ6 642 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 RPAINQ86UA6 219 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 ALYREFQ86V81 257 aaKnown RBP14.88□□□□□ -0.03
LINC00339-203ENST00000420503 PABPC5Q96DU9 382 aaKnown RBP14.88□□□□□ -0.03
LINC00339-203ENST00000420503 RC3H2Q9HBD1 1191 aaKnown RBP14.88□□□□□ -0.03
LINC00339-203ENST00000420503 MAP3K20Q9NYL2 800 aaKnown RBP14.88□□□□□ -0.03
LINC00339-203ENST00000420503 TTC3P53804 2025 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 LOXHD1Q8IVV2 1947 aa14.88□□□□□ -0.03
LINC00339-203ENST00000420503 WDFY4Q6ZS81 3184 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 E7EWF7 191 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 HIP1O00291 1037 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 MEIS2O14770 477 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 FIBPO43427 364 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 PLEKHA8P1O95397 391 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 RXRAP19793 462 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 NT5C2P49902 561 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 MGAT3Q09327 533 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 HYAL1Q12794 435 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 WTAPQ15007 396 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 PTPROQ16827 1216 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 FAM26DQ5JW98 314 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 NSUN3Q9H649 340 aaKnown RBP14.87□□□□□ -0.03
LINC00339-203ENST00000420503 PCDHGC5Q9Y5F6 944 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 TRIOO75962 3097 aa14.87□□□□□ -0.03
LINC00339-203ENST00000420503 GSTTP1A0A1W2PQM5 241 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 PRR33A8MZF0 331 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 TBX10O75333 385 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 ITGB5P18084 799 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 GATMP50440 423 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 CAMK1Q14012 370 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 NEDD9Q14511 834 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 UBE2SQ16763 222 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 MARCH8Q5T0T0 291 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 MB21D2Q8IYB1 491 aaPredicted RBP14.86□□□□□ -0.03
LINC00339-203ENST00000420503 IGDCC4Q8TDY8 1250 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 IL17RAQ96F46 866 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 YTHDC1Q96MU7 727 aaKnown RBP14.86□□□□□ -0.03
LINC00339-203ENST00000420503 EHMT1Q9H9B1 1298 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 AGO3Q9H9G7 860 aaKnown RBP14.86□□□□□ -0.03
LINC00339-203ENST00000420503 ADGRA3Q8IWK6 1321 aa14.86□□□□□ -0.03
LINC00339-203ENST00000420503 CAND2O75155 1236 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 KCNA2P16389 499 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 DNAJB1P25685 340 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 CHMLP26374 656 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 IRS1P35568 1242 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 TCF7P36402 384 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-203ENST00000420503 GNPTABQ3T906 1256 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 PCNX4Q63HM2 1172 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 RTN4RL1Q86UN2 441 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-203ENST00000420503 FIBCD1Q8N539 461 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 SMARCC2Q8TAQ2 1214 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 DNAJB3Q8WWF6 145 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 SAMD11Q96NU1 681 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 PCYT2Q99447 389 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 IGFLR1Q9H665 355 aa14.85□□□□□ -0.03
LINC00339-203ENST00000420503 ALG13Q9NP73 1137 aaKnown RBP14.85□□□□□ -0.03
LINC00339-203ENST00000420503 ARIH1Q9Y4X5 557 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-203ENST00000420503 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 ENPP3O14638 875 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 DCXO43602 365 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 BMPR1AP36894 532 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 IGBP1P78318 339 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 TMEM62Q0P6H9 643 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 TRDNQ13061 729 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 PPFIA1Q13136 1202 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 GRIK4Q16099 956 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 CTC1Q2NKJ3 1217 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 ADGRD2Q7Z7M1 963 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 SRBD1Q8N5C6 995 aaKnown RBP14.84□□□□□ -0.03
LINC00339-203ENST00000420503 SAMD3Q8N6K7 520 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 TRAPPC12Q8WVT3 735 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 FAM49AQ9H0Q0 323 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-203ENST00000420503 LY9Q9HBG7 655 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 MUTYHQ9UIF7 546 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 ZNF215Q9UL58 517 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-203ENST00000420503 CDY2AQ9Y6F7 541 aa14.84□□□□□ -0.03
LINC00339-203ENST00000420503 MRPL42Q9Y6G3 142 aaKnown RBP14.84□□□□□ -0.03
LINC00339-203ENST00000420503 C5orf67F2Z3F1 127 aa14.83□□□□□ -0.04
LINC00339-203ENST00000420503 IBSPP21815 317 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-203ENST00000420503 CD52P31358 61 aa14.83□□□□□ -0.04
LINC00339-203ENST00000420503 HFE2Q6ZVN8 426 aa14.83□□□□□ -0.04
LINC00339-203ENST00000420503 CATIPQ7Z7H3 387 aa14.83□□□□□ -0.04
LINC00339-203ENST00000420503 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
LINC00339-203ENST00000420503 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
LINC00339-203ENST00000420503 NCOA7Q8NI08 942 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms