RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TRIM22Q8IYM9 498 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 HERVK_113Q902F9 699 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 GTF3C6Q969F1 213 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 RNPC3Q96LT9 517 aaKnown RBP23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 RNPEPQ9H4A4 650 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 CXXC1Q9P0U4 656 aaPredicted RBP23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 CPLX1O14810 134 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 ATG7O95352 703 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 NEK4P51957 841 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 SMAD3P84022 425 aaKnown RBP23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 PTK7Q13308 1070 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 PSRC1Q6PGN9 363 aaPredicted RBP23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 SERINC5Q86VE9 423 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 FAM177A1Q8N128 213 aaPredicted RBP23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 NECAB1Q8N987 351 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 SEPT1Q8WYJ6 367 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 PCDHA4Q9UN74 947 aa23.51■■□□□ 1.35
PKNOX1-202ENST00000418336 COL6A3P12111 3177 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 CCNE2O96020 404 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 Q7L0L9 218 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 CAGE1Q8TC20 777 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 PHF20Q9BVI0 1012 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 JPH1Q9HDC5 661 aaPredicted RBP23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 GJB4Q9NTQ9 266 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 SLC9A2Q9UBY0 812 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 EMSYQ7Z589 1322 aa23.5■■□□□ 1.35
PKNOX1-202ENST00000418336 IGKV6D-21A0A0A0MT36 114 aa23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 CKBP12277 381 aa23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 RBM25P49756 843 aaKnown RBP23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 MBTPS1Q14703 1052 aa23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 TCTN1Q2MV58 587 aa23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 UTP14CQ5TAP6 766 aaKnown RBP23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 BICD2Q8TD16 824 aa23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 AFAP1L1Q8TED9 768 aa23.49■■□□□ 1.35
PKNOX1-202ENST00000418336 TREHO43280 583 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 RFC2P35250 354 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 NLRP5P59047 1200 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 ACTR2P61160 394 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 BFSP2Q13515 415 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 PLA2G4DQ86XP0 818 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 BLIDQ8IZY5 108 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 NSUN7Q8NE18 718 aaKnown RBP23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 SETD4Q9NVD3 440 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 KCNJ14Q9UNX9 436 aa23.48■■□□□ 1.35
PKNOX1-202ENST00000418336 C17orf102A2RUQ5 167 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 NBNO60934 754 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 CDKL5O76039 1030 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 FGBP02675 491 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 CXCL10P02778 98 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 MARCH8Q5T0T0 291 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 CPLX2Q6PUV4 134 aaKnown RBP23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 LMBR1Q8WVP7 490 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 MBOAT7Q96N66 472 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 NOD1Q9Y239 953 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 CHD9Q3L8U1 2897 aa23.47■■□□□ 1.35
PKNOX1-202ENST00000418336 PFKMP08237 780 aa23.46■■□□□ 1.35
PKNOX1-202ENST00000418336 SELPP16109 830 aa23.46■■□□□ 1.35
PKNOX1-202ENST00000418336 ABHD15Q6UXT9 468 aa23.46■■□□□ 1.35
PKNOX1-202ENST00000418336 LRRC8DQ7L1W4 858 aa23.46■■□□□ 1.35
PKNOX1-202ENST00000418336 OTOP2Q7RTS6 562 aa23.46■■□□□ 1.35
PKNOX1-202ENST00000418336 TTYH1Q9H313 450 aaPredicted RBP23.46■■□□□ 1.35
PKNOX1-202ENST00000418336 MTMR10Q9NXD2 777 aa23.46■■□□□ 1.35
PKNOX1-202ENST00000418336 PTPRSQ13332 1948 aa23.45■■□□□ 1.35
PKNOX1-202ENST00000418336 GRXCR1A8MXD5 290 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 USP11P51784 963 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 ZNF618Q5T7W0 954 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 GALNT17Q6IS24 598 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 DEFB128Q7Z7B8 93 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 RPUSD2Q8IZ73 545 aaKnown RBP23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 OXER1Q8TDS5 423 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 TBCKQ8TEA7 893 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 UIMC1Q96RL1 719 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 SDF4Q9BRK5 362 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 OSBPL7Q9BZF2 842 aa23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 ZNF215Q9UL58 517 aaPredicted RBP23.45■■□□□ 1.34
PKNOX1-202ENST00000418336 CYP3A7-CYP3A51PA0A087WV96 503 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 MBLAC1A4D2B0 266 aaPredicted RBP23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 IPO5O00410 1097 aaKnown RBP23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 MSH4O15457 936 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 JAK2O60674 1132 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 CYP3A7P24462 503 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 ZNF76P36508 570 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 SETQ01105 290 aaPredicted RBP23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 MKRN4PQ13434 485 aaPredicted RBP23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 DEFB123Q8N688 67 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 RETREG2Q8NC44 543 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 TNFRSF25Q93038 417 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 ATP6V0A1Q93050 837 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 C22orf23Q9BZE7 217 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 SMARCAD1Q9H4L7 1026 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 ERAP1Q9NZ08 941 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 GBF1Q92538 1859 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 SIP14410 1827 aa23.44■■□□□ 1.34
PKNOX1-202ENST00000418336 NRCAMQ92823 1304 aa23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 PBX2P40425 430 aa23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 PRR16Q569H4 304 aa23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 EARS2Q5JPH6 523 aaKnown RBP23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 PLPPR4Q7Z2D5 763 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms