RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 KCNB2Q92953 911 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 PBXIP1Q96AQ6 731 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 JAKMIP1Q96N16 626 aaKnown RBP20.77■□□□□ 0.92
VCP-202ENST00000417448 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 DCHS1Q96JQ0 3298 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 KIAA1671Q9BY89 1806 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 C5orf67F2Z3F1 127 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 CTNNB1P35222 781 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 LAMC2Q13753 1193 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 RMDN3Q96TC7 470 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 MYL10Q9BUA6 226 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 IFIH1Q9BYX4 1025 aaKnown RBP20.76■□□□□ 0.91
VCP-202ENST00000417448 LY9Q9HBG7 655 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 MRVI1Q9Y6F6 885 aa20.76■□□□□ 0.91
VCP-202ENST00000417448 ERICH2A1L162 156 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 SH2B2O14492 632 aaPredicted RBP20.75■□□□□ 0.91
VCP-202ENST00000417448 SORBS3O60504 671 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 GFRA3O60609 400 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 CSPG5O95196 566 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 HOXC8P31273 242 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 HSDL1Q3SXM5 330 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 TSGA10IPQ3SY00 556 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 C8orf34Q49A92 452 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 STAG2Q8N3U4 1231 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 SEPT8Q92599 483 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 IWS1Q96ST2 819 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 C16orf70Q9BSU1 422 aa20.75■□□□□ 0.91
VCP-202ENST00000417448 CACNA1AO00555 2505 aa20.74■□□□□ 0.91
VCP-202ENST00000417448 CTSHP09668 335 aa20.74■□□□□ 0.91
VCP-202ENST00000417448 EIF2AK2P19525 551 aaKnown RBP20.74■□□□□ 0.91
VCP-202ENST00000417448 EXOSC10Q01780 885 aaKnown RBP20.74■□□□□ 0.91
VCP-202ENST00000417448 MYSM1Q5VVJ2 828 aa20.74■□□□□ 0.91
VCP-202ENST00000417448 LMAN2LQ9H0V9 348 aa20.74■□□□□ 0.91
VCP-202ENST00000417448 IGFLR1Q9H665 355 aa20.74■□□□□ 0.91
VCP-202ENST00000417448 CD207Q9UJ71 328 aa20.74■□□□□ 0.91
VCP-202ENST00000417448 VPS13AQ96RL7 3174 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 TREHO43280 583 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 RGS20O76081 388 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 RXRAP19793 462 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 BMPR1AP36894 532 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 NT5C2P49902 561 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 ZXDAP98168 799 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 CAMK1Q14012 370 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 SART3Q15020 963 aaKnown RBP20.73■□□□□ 0.91
VCP-202ENST00000417448 NFXL1Q6ZNB6 911 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 SUGP1Q8IWZ8 645 aaKnown RBP20.73■□□□□ 0.91
VCP-202ENST00000417448 FBXL6Q8N531 539 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 FIBCD1Q8N539 461 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 ATP6V0A1Q93050 837 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 MSLNLQ96KJ4 702 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 PRRX2Q99811 253 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 RC3H2Q9HBD1 1191 aaKnown RBP20.73■□□□□ 0.91
VCP-202ENST00000417448 VAT1LQ9HCJ6 419 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 DOCK5Q9H7D0 1870 aa20.73■□□□□ 0.91
VCP-202ENST00000417448 PTPRZ1P23471 2315 aaPredicted RBP20.72■□□□□ 0.91
VCP-202ENST00000417448 PPFIA4O75335 1185 aa20.72■□□□□ 0.91
VCP-202ENST00000417448 EIF3JO75822 258 aaKnown RBP20.72■□□□□ 0.91
VCP-202ENST00000417448 VCPP55072 806 aaKnown RBP20.72■□□□□ 0.91
VCP-202ENST00000417448 ADAM15Q13444 863 aa20.72■□□□□ 0.91
VCP-202ENST00000417448 KRT32Q14532 448 aa20.72■□□□□ 0.91
VCP-202ENST00000417448 CDC37Q16543 378 aaPredicted RBP20.72■□□□□ 0.91
VCP-202ENST00000417448 ARHGEF16Q5VV41 709 aa20.72■□□□□ 0.91
VCP-202ENST00000417448 DHX32Q7L7V1 743 aaKnown RBP20.72■□□□□ 0.91
VCP-202ENST00000417448 IL17RAQ96F46 866 aa20.72■□□□□ 0.91
VCP-202ENST00000417448 C11orf84Q9BUA3 381 aaPredicted RBP20.72■□□□□ 0.91
VCP-202ENST00000417448 ABCB11O95342 1321 aa20.72■□□□□ 0.91
VCP-202ENST00000417448 C17orf102A2RUQ5 167 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 EYA4O95677 639 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 RB1P06400 928 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 NR3C2P08235 984 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 PARP1P09874 1014 aaKnown RBP20.71■□□□□ 0.91
VCP-202ENST00000417448 SP2Q02086 613 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 PKN1Q16512 942 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 ZNF654Q8IZM8 581 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 MAF1Q9H063 256 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 PXMP2Q9NR77 195 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 CLEC1BQ9P126 229 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 MAD2L2Q9UI95 211 aa20.71■□□□□ 0.91
VCP-202ENST00000417448 LOC730098B7Z3J9 87 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 MMP1P03956 469 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 SMIM10L2AP0DMW4 78 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 SMIM10L2BP0DMW5 78 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 SLC35G1Q2M3R5 365 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 CELF3Q5SZQ8 465 aaKnown RBP20.7■□□□□ 0.9
VCP-202ENST00000417448 BLOC1S2Q6QNY1 142 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 CLP1Q92989 425 aaKnown RBP20.7■□□□□ 0.9
VCP-202ENST00000417448 TMEM87BQ96K49 555 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 SPATA33Q96N06 139 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 RNPEPQ9H4A4 650 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 BRPF3Q9ULD4 1205 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 RIF1Q5UIP0 2472 aaKnown RBP20.7■□□□□ 0.9
VCP-202ENST00000417448 ADGRA3Q8IWK6 1321 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 TTC3P53804 2025 aa20.7■□□□□ 0.9
VCP-202ENST00000417448 CCDC69A6NI79 296 aa20.69■□□□□ 0.9
VCP-202ENST00000417448 GGPS1O95749 300 aa20.69■□□□□ 0.9
VCP-202ENST00000417448 TROAPQ12815 778 aa20.69■□□□□ 0.9
VCP-202ENST00000417448 CBX2Q14781 532 aaPredicted RBP20.69■□□□□ 0.9
VCP-202ENST00000417448 GRM4Q14833 912 aa20.69■□□□□ 0.9
VCP-202ENST00000417448 GPATCH4Q5T3I0 446 aaKnown RBP20.69■□□□□ 0.9
VCP-202ENST00000417448 Q6ZUG5 572 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms