RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 HOXC8P31273 242 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 LPIN1Q14693 890 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 VSIG10LQ86VR7 867 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 HOMER1Q86YM7 354 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 FBXL6Q8N531 539 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 LMBR1Q8WVP7 490 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 ESR2Q92731 530 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 EVI5LQ96CN4 794 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 MSLNLQ96KJ4 702 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 APOL5Q9BWW9 433 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 TLR9Q9NR96 1032 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 PLAGL2Q9UPG8 496 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 USP15Q9Y4E8 981 aaPredicted RBP10.88□□□□□ -0.67
LINC01238-201ENST00000416204 ZDBF2Q9HCK1 2354 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 LOC730098B7Z3J9 87 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 ENPP3O14638 875 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 GLP2RO95838 553 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 ITGB1P05556 798 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 RB1P06400 928 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 CCND2P30279 289 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 ASPRV1Q53RT3 343 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 DGKHQ86XP1 1220 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 ENAHQ8N8S7 591 aaPredicted RBP10.87□□□□□ -0.67
LINC01238-201ENST00000416204 LINC01599Q8WXQ3 324 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 PIBF1Q8WXW3 757 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 APBB2Q92870 758 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 ZSCAN10Q96SZ4 725 aaPredicted RBP10.87□□□□□ -0.67
LINC01238-201ENST00000416204 AMNQ9BXJ7 453 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 LMAN2LQ9H0V9 348 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 RC3H2Q9HBD1 1191 aaKnown RBP10.87□□□□□ -0.67
LINC01238-201ENST00000416204 PCDHA1Q9Y5I3 950 aa10.87□□□□□ -0.67
LINC01238-201ENST00000416204 SALL3Q9BXA9 1300 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 COL4A6Q14031 1691 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 MARK3P27448 753 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 CD52P31358 61 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 IGBP1P78318 339 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 SLC35G1Q2M3R5 365 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 ANKRD45Q5TZF3 282 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 STOX1Q6ZVD7 989 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 BMP8AQ7Z5Y6 402 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 KLHL23Q8NBE8 558 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 SMRP1Q8NCR6 262 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 SPPL3Q8TCT6 385 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 POF1BQ8WVV4 589 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
LINC01238-201ENST00000416204 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 GPR20Q99678 358 aa10.86□□□□□ -0.67
LINC01238-201ENST00000416204 DCHS1Q96JQ0 3298 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 SPTBN4Q9H254 2564 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 RALGAPA2Q2PPJ7 1873 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 ZNF213O14771 459 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 CAND2O75155 1236 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 DGKIO75912 1065 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 EYA4O95677 639 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 GNAT1P11488 350 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 AVPR2P30518 371 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 MRPS9P82933 396 aaKnown RBP10.85□□□□□ -0.67
LINC01238-201ENST00000416204 TMEM62Q0P6H9 643 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 KCNV1Q6PIU1 500 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 ASCL5Q7RTU5 278 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 IQCA1Q86XH1 822 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 EFHBQ8N7U6 833 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 VN1R2Q8NFZ6 395 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 MICAL1Q8TDZ2 1067 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 DNAJB3Q8WWF6 145 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
LINC01238-201ENST00000416204 ASIC4Q96FT7 647 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 FAM49AQ9H0Q0 323 aaPredicted RBP10.85□□□□□ -0.67
LINC01238-201ENST00000416204 RNF41Q9H4P4 317 aaPredicted RBP10.85□□□□□ -0.67
LINC01238-201ENST00000416204 AGO3Q9H9G7 860 aaKnown RBP10.85□□□□□ -0.67
LINC01238-201ENST00000416204 PKD2L1Q9P0L9 805 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 HCSTQ9UBK5 93 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 CDH22Q9UJ99 828 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 RWDD3Q9Y3V2 267 aa10.85□□□□□ -0.67
LINC01238-201ENST00000416204 GCOM1H8Y6P7 765 aaPredicted RBP10.84□□□□□ -0.67
LINC01238-201ENST00000416204 POLR2MP0CAP2 368 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 TGFB3P10600 412 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 PDE1AP54750 535 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 ADAM17P78536 824 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 SIGLEC14Q08ET2 396 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 MGAT3Q09327 533 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 COASYQ13057 564 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 FBXO47Q5MNV8 452 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 LLGL2Q6P1M3 1020 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 ZBTB33Q86T24 672 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 RTN4RL1Q86UN2 441 aaPredicted RBP10.84□□□□□ -0.67
LINC01238-201ENST00000416204 PIGSQ96S52 555 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
LINC01238-201ENST00000416204 USP26Q9BXU7 913 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 TLE6Q9H808 572 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 EHMT1Q9H9B1 1298 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 ZSWIM5Q9P217 1185 aa10.84□□□□□ -0.67
LINC01238-201ENST00000416204 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
LINC01238-201ENST00000416204 CDY2AQ9Y6F7 541 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms