RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 TRMT13Q9NUP7 481 aaKnown RBP11.03□□□□□ -0.64
LINC01090-201ENST00000415357 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
LINC01090-201ENST00000415357 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
LINC01090-201ENST00000415357 NID2Q14112 1375 aa11.03□□□□□ -0.64
LINC01090-201ENST00000415357 EPB41L2O43491 1005 aaKnown RBP11.02□□□□□ -0.65
LINC01090-201ENST00000415357 TIMP1P01033 207 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 ZNF286BP0CG31 522 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 CYP2C9P11712 490 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 CYP2C18P33260 490 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 RCAN1P53805 252 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 FPGSQ05932 587 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.65
LINC01090-201ENST00000415357 HSDL1Q3SXM5 330 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 CELF3Q5SZQ8 465 aaKnown RBP11.02□□□□□ -0.65
LINC01090-201ENST00000415357 RUFY3Q7L099 469 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 KAT2BQ92831 832 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 PHKBQ93100 1093 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
LINC01090-201ENST00000415357 TELO2Q9Y4R8 837 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 PCDHB3Q9Y5E6 796 aa11.02□□□□□ -0.65
LINC01090-201ENST00000415357 RBAK-RBAKDNI3L0D1 243 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 ACTN4O43707 911 aaKnown RBP11.01□□□□□ -0.65
LINC01090-201ENST00000415357 KPNA6O60684 536 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 CSF2RAP15509 400 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 CCL23P55773 120 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 COPS2P61201 443 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 CCT2P78371 535 aaKnown RBP11.01□□□□□ -0.65
LINC01090-201ENST00000415357 LAMC2Q13753 1193 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 LRIT3Q3SXY7 679 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 GNPTABQ3T906 1256 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 MYSM1Q5VVJ2 828 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 PCNX4Q63HM2 1172 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 MFSD5Q6N075 450 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 PPP1R18Q6NYC8 613 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 FBXL16Q8N461 479 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 PPTC7Q8NI37 304 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
LINC01090-201ENST00000415357 SPATA33Q96N06 139 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 NOC4LQ9BVI4 516 aaKnown RBP11.01□□□□□ -0.65
LINC01090-201ENST00000415357 HIPK3Q9H422 1215 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 TMEM260Q9NX78 707 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 BARHL2Q9NY43 387 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 PCDHA6Q9UN73 950 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 PCDHA8Q9Y5H6 950 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 CYP46A1Q9Y6A2 500 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 DOCK5Q9H7D0 1870 aa11.01□□□□□ -0.65
LINC01090-201ENST00000415357 MYH7BA7E2Y1 1941 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 CCDC196A0A1B0GTZ2 297 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 SMCO2A6NFE2 343 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 SPDYE3A6NKU9 549 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 SPATA31C2B4DYI2 1134 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 FIBPO43427 364 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 STAM2O75886 525 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 ACRP10323 421 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 SCG2P13521 617 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 PDIA3P30101 505 aaKnown RBP11□□□□□ -0.65
LINC01090-201ENST00000415357 ICAM3P32942 547 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 ADCY7P51828 1080 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 SP4Q02446 784 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 NTRK3Q16288 839 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 PKN1Q16512 942 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 DGKDQ16760 1214 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 PFKFB3Q16875 520 aaPredicted RBP11□□□□□ -0.65
LINC01090-201ENST00000415357 PUS10Q3MIT2 529 aaKnown RBP11□□□□□ -0.65
LINC01090-201ENST00000415357 KCNV1Q6PIU1 500 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 CYFIP1Q7L576 1253 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 SCLYQ96I15 445 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 BUD13Q9BRD0 619 aaKnown RBP eCLIP11□□□□□ -0.65
LINC01090-201ENST00000415357 ALG1Q9BT22 464 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 ANO3Q9BYT9 981 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 TM6SF1Q9BZW5 370 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 WNT8AQ9H1J5 351 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 MLXIPQ9HAP2 919 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 RIC8AQ9NPQ8 531 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 PKD2L1Q9P0L9 805 aa11□□□□□ -0.65
LINC01090-201ENST00000415357 DTNBO60941 627 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 ATP9AO75110 1047 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 F2P00734 622 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 TGFB3P10600 412 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 HOXD8P13378 290 aaPredicted RBP10.99□□□□□ -0.65
LINC01090-201ENST00000415357 ITGB5P18084 799 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 EVCP57679 992 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 STK3Q13188 491 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 PPIGQ13427 754 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC01090-201ENST00000415357 GDF6Q6KF10 455 aaPredicted RBP10.99□□□□□ -0.65
LINC01090-201ENST00000415357 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 Q7L0L9 218 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 C16orf59Q7L2K0 433 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 RNPC3Q96LT9 517 aaKnown RBP10.99□□□□□ -0.65
LINC01090-201ENST00000415357 MTRQ99707 1265 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 SEZ6LQ9BYH1 1024 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 PDRG1Q9NUG6 133 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 HDAC6Q9UBN7 1215 aa10.99□□□□□ -0.65
LINC01090-201ENST00000415357 hCG_1984214I3L0E3 225 aa10.98□□□□□ -0.65
LINC01090-201ENST00000415357 PRPF3O43395 683 aaKnown RBP10.98□□□□□ -0.65
LINC01090-201ENST00000415357 KCNA2P16389 499 aa10.98□□□□□ -0.65
LINC01090-201ENST00000415357 IFNAR1P17181 557 aa10.98□□□□□ -0.65
LINC01090-201ENST00000415357 KIAA0753Q2KHM9 967 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms