RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CADM3Q8N126 398 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 COG1Q8WTW3 980 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PEX13Q92968 403 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 DHX58Q96C10 678 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 COG3Q96JB2 828 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 NSMCE3Q96MG7 304 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TUBGCP5Q96RT8 1024 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ZSWIM6Q9HCJ5 1215 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ZBTB1Q9Y2K1 713 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PXDNLA1KZ92 1463 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 MAGEB3O15480 346 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 RNF113AO15541 343 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 PPIP5K2O43314 1243 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 NAGAP17050 411 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 CCND1P24385 295 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TNNI2P48788 182 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TBL3Q12788 808 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 TAF11Q15544 211 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PTGISQ16647 500 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 IL23RQ5VWK5 629 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ZNF449Q6P9G9 518 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 VSTM4Q8IW00 320 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 CYP4X1Q8N118 509 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ABTB1Q969K4 478 aaPredicted RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 CATSPER2Q96P56 530 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 FERD3LQ96RJ6 166 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ZC3H7BQ9UGR2 993 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 NEDD4P46934 1319 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 USP42Q9H9J4 1324 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 MAGEA13PA6NCF6 341 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 CCDC169A6NNP5 214 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PRSS47A8MTI9 375 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 AP3B1O00203 1094 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ACSL4O60488 711 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 NMT2O60551 498 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PFKFB2O60825 505 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 SEC24DO94855 1032 aaPredicted RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 CETN2P41208 172 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 HAAOP46952 286 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PDCLQ13371 301 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 SPCS2Q15005 226 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 STK11Q15831 433 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PDCD4Q53EL6 469 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 METTL21CQ5VZV1 264 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 CCDC102BQ68D86 513 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 CCDC81Q6ZN84 652 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 RFPL4BQ6ZWI9 263 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 C16orf71Q8IYS4 520 aaPredicted RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 SLC38A6Q8IZM9 456 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 LSMEM1Q8N8F7 131 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 FBXL18Q96ME1 805 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 FAM192AQ9GZU8 254 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 LSG1Q9H089 658 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 NSRP1Q9H0G5 558 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 SNX25Q9H3E2 840 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 FAM208AQ9UK61 1670 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 NRKQ7Z2Y5 1582 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CACNA1FO60840 1977 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 PLSCR1O15162 318 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 BAG3O95817 575 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 GSTA2P09210 222 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 POTEJP0CG39 1038 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 TNFRSF8P28908 595 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 MXI1P50539 228 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 TUBA3CQ13748 450 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 TNIP1Q15025 636 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 C15orf59Q2T9L4 293 aaPredicted RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 NXNQ6DKJ4 435 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 HIBCHQ6NVY1 386 aaPredicted RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 CYP26C1Q6V0L0 522 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 ZNF600Q6ZNG1 722 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 BEND5Q7L4P6 421 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 STKLD1Q8NE28 680 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 MYCBPAPQ8TBZ2 947 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 OTUD7AQ8TE49 926 aaPredicted RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 HIC2Q96JB3 615 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 NAA15Q9BXJ9 866 aaKnown RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 TRPC7Q9HCX4 862 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 RCOR1Q9UKL0 485 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 ATP10BO94823 1461 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CAMSAP1Q5T5Y3 1602 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 HOXA2O43364 376 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 PRC1O43663 620 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 KPNA6O60684 536 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CHRNB1P11230 501 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 LSP1P33241 339 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 FLIIQ13045 1269 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 RESTQ13127 1097 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 KIF22Q14807 665 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CAMK4Q16566 473 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 PHLDB3Q6NSJ2 640 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 MAEAQ7L5Y9 396 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 HDGFL2Q7Z4V5 671 aaPredicted RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 TREML1Q86YW5 311 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 SPARTQ8N0X7 666 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 USP38Q8NB14 1042 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CFAP61Q8NHU2 1237 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 STARD8Q92502 1023 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 FAM136AQ96C01 138 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms