RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 ERVK-21P61565 698 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 EXOSC10Q01780 885 aaKnown RBP18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 SGMS1Q86VZ5 419 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 FANCBQ8NB91 859 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 CUL5Q93034 780 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 PCYT2Q99447 389 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 SENP7Q9BQF6 1050 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 LZTS2Q9BRK4 669 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 C17orf80Q9BSJ5 609 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 MYO7AQ13402 2215 aa18.98■□□□□ 0.63
SCAMP4-203ENST00000411971 TCF7P36402 384 aaPredicted RBP18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 GNAQP50148 359 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 SKIV2LQ15477 1246 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 WWC2Q6AWC2 1192 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 APOA5Q6Q788 366 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 TMTC2Q8N394 836 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 CYP2W1Q8TAV3 490 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 UHRF1Q96T88 793 aaPredicted RBP18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 FAM217BQ9NTX9 383 aaPredicted RBP18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 PCDHA6Q9UN73 950 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 PCDHA8Q9Y5H6 950 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 SLC12A7Q9Y666 1083 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 COL4A6Q14031 1691 aa18.97■□□□□ 0.63
SCAMP4-203ENST00000411971 GTPBP6O43824 516 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 CHRNA1P02708 482 aa18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 HTRA4P83105 476 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 ARHGAP4P98171 946 aa18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 BMP2KLQ5H9B9 411 aa18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 MARCH8Q5T0T0 291 aa18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 XRRA1Q6P2D8 792 aa18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 MYOCDQ8IZQ8 938 aa18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 GPRASP2Q96D09 838 aa18.96■□□□□ 0.63
SCAMP4-203ENST00000411971 CPA1P15085 419 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 MARK3P27448 753 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 CDC27P30260 824 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 FAM26DQ5JW98 314 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 HEATR3Q7Z4Q2 680 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 NLRX1Q86UT6 975 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 SP7Q8TDD2 431 aaPredicted RBP18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 TGS1Q96RS0 853 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 RAPGEFL1Q9UHV5 662 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 EMSYQ7Z589 1322 aa18.95■□□□□ 0.62
SCAMP4-203ENST00000411971 CALM1P0DP23 149 aa18.94■□□□□ 0.62
SCAMP4-203ENST00000411971 CALM2P0DP24 149 aa18.94■□□□□ 0.62
SCAMP4-203ENST00000411971 CALM3P0DP25 149 aa18.94■□□□□ 0.62
SCAMP4-203ENST00000411971 MGAT3Q09327 533 aa18.94■□□□□ 0.62
SCAMP4-203ENST00000411971 NEK1Q96PY6 1258 aa18.94■□□□□ 0.62
SCAMP4-203ENST00000411971 TMEM260Q9NX78 707 aa18.94■□□□□ 0.62
SCAMP4-203ENST00000411971 KIAA1671Q9BY89 1806 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 RALGAPA2Q2PPJ7 1873 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 EFCAB14O75071 495 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 UPP2O95045 317 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 ARP10275 920 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 TOP1MTQ969P6 601 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 JADE2Q9NQC1 790 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 WDR81Q562E7 1941 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 TTC3P53804 2025 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 EVPLQ92817 2033 aa18.93■□□□□ 0.62
SCAMP4-203ENST00000411971 STXBP3O00186 592 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 AMHP03971 560 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 MTMR1Q13613 665 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 SEPT1Q8WYJ6 367 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 SEPT8Q92599 483 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 EHMT1Q9H9B1 1298 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 ZNF215Q9UL58 517 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 INSL6Q9Y581 213 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 NRCAMQ92823 1304 aa18.92■□□□□ 0.62
SCAMP4-203ENST00000411971 LINC00271P0C7V0 271 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 GHRP10912 638 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 PPFIA1Q13136 1202 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 ITGB3BPQ13352 177 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 LPIN1Q14693 890 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 GRIK4Q16099 956 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 TSGA10IPQ3SY00 556 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 DHX32Q7L7V1 743 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 TRAPPC12Q8WVT3 735 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 DNAJB3Q8WWF6 145 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 KHSRPQ92945 711 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 MXRA8Q9BRK3 442 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 TSPYL2Q9H2G4 693 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 RIC8AQ9NPQ8 531 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 KCNH7Q9NS40 1196 aa18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 V9GY48 417 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-203ENST00000411971 MBLAC1A4D2B0 266 aaPredicted RBP18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 SPDYE3A6NKU9 549 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 CAND2O75155 1236 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 CLK2P49760 499 aaKnown RBP18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 NAPAP54920 295 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 RTN1Q16799 776 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 CENPQQ7L2Z9 268 aaPredicted RBP18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 RPAINQ86UA6 219 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 GIMAP8Q8ND71 665 aaPredicted RBP18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 LINC01599Q8WXQ3 324 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 HLA-CQ95604 372 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 UIMC1Q96RL1 719 aa18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 IFIH1Q9BYX4 1025 aaKnown RBP18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 AGO3Q9H9G7 860 aaKnown RBP18.9■□□□□ 0.62
SCAMP4-203ENST00000411971 KLF18A0A0U1RQI7 1052 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms