RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 CHAMP1Q96JM3 812 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 NT5C3AQ9H0P0 336 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 AP5M1Q9H0R1 490 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 HMX1Q9NP08 348 aaPredicted RBP20.97■□□□□ 0.95
CDC42-204ENST00000411827 DISC1Q9NRI5 854 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 DDX49Q9Y6V7 483 aaKnown RBP20.97■□□□□ 0.95
CDC42-204ENST00000411827 MCM3APO60318 1980 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 FAM237AA0A1B0GTK4 181 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 KPNA6O60684 536 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 PPFIA4O75335 1185 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 ATG7O95352 703 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 INHAP05111 366 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 SMPD1P17405 629 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 NKX3-2P78367 333 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 SLC9C1Q4G0N8 1177 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 MRPS27Q92552 414 aaKnown RBP20.96■□□□□ 0.95
CDC42-204ENST00000411827 CALML4Q96GE6 196 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 CCDC34Q96HJ3 373 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 POLR3CQ9BUI4 534 aaPredicted RBP20.96■□□□□ 0.95
CDC42-204ENST00000411827 UNC45AQ9H3U1 944 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 TUFT1Q9NNX1 390 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 USP25Q9UHP3 1055 aa20.96■□□□□ 0.95
CDC42-204ENST00000411827 GNEQ9Y223 722 aaKnown RBP20.96■□□□□ 0.95
CDC42-204ENST00000411827 ARIH2O95376 493 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 MBD3O95983 291 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 P4HBP07237 508 aaKnown RBP20.95■□□□□ 0.94
CDC42-204ENST00000411827 RARBP10826 455 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 RPA1P27694 616 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 CPT1AP50416 773 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 SLC26A2P50443 739 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 ACTR2P61160 394 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 ARHGAP1Q07960 439 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 PRAMEF19Q5SWL8 479 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 NCAPH2Q6IBW4 605 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 CCDC73Q6ZRK6 1079 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 ATP6V0A1Q93050 837 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 SPATA33Q96N06 139 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 CLIC6Q96NY7 704 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 LMBRD1Q9NUN5 540 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 PKD2L1Q9P0L9 805 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 SAMM50Q9Y512 469 aa20.95■□□□□ 0.94
CDC42-204ENST00000411827 HYIQ5T013 277 aa20.94■□□□□ 0.94
CDC42-204ENST00000411827 FAM160B1Q5W0V3 765 aa20.94■□□□□ 0.94
CDC42-204ENST00000411827 SHC4Q6S5L8 630 aa20.94■□□□□ 0.94
CDC42-204ENST00000411827 CABP7Q86V35 215 aa20.94■□□□□ 0.94
CDC42-204ENST00000411827 CDK5RAP3Q96JB5 506 aa20.94■□□□□ 0.94
CDC42-204ENST00000411827 HSD17B14Q9BPX1 270 aa20.94■□□□□ 0.94
CDC42-204ENST00000411827 CUEDC2Q9H467 287 aa20.94■□□□□ 0.94
CDC42-204ENST00000411827 POTEMA6NI47 508 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 A6NJR5 290 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 CCNE2O96020 404 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 XRCC6P12956 609 aaKnown RBP eCLIP20.93■□□□□ 0.94
CDC42-204ENST00000411827 HOXD8P13378 290 aaPredicted RBP20.93■□□□□ 0.94
CDC42-204ENST00000411827 CNGA1P29973 690 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 SKOR2Q2VWA4 1001 aaPredicted RBP20.93■□□□□ 0.94
CDC42-204ENST00000411827 ABHD15Q6UXT9 468 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 TRPV1Q8NER1 839 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 OR6J1Q8NGC5 347 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 SNX29Q8TEQ0 813 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 SYMPKQ92797 1274 aaKnown RBP20.93■□□□□ 0.94
CDC42-204ENST00000411827 GPR20Q99678 358 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 EIF2AK1Q9BQI3 630 aaKnown RBP20.93■□□□□ 0.94
CDC42-204ENST00000411827 AZI2Q9H6S1 392 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 ZSWIM4Q9H7M6 989 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 KCNH3Q9ULD8 1083 aa20.93■□□□□ 0.94
CDC42-204ENST00000411827 IGKV6D-21A0A0A0MT36 114 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 DDX39AO00148 427 aaKnown RBP20.92■□□□□ 0.94
CDC42-204ENST00000411827 CHMP2AO43633 222 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 ZEB2O60315 1214 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 LYPLA2O95372 231 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 SUPT20HL2P0C7V6 817 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 CCT6AP40227 531 aaKnown RBP20.92■□□□□ 0.94
CDC42-204ENST00000411827 QARSP47897 775 aaKnown RBP20.92■□□□□ 0.94
CDC42-204ENST00000411827 GJA9P57773 515 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 PSMC5P62195 406 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 FAM160A1Q05DH4 1040 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 DGKDQ16760 1214 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 TLK2Q86UE8 772 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 FSIP1Q8NA03 581 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 IQUBQ8NA54 791 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 RASSF8Q8NHQ8 419 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 AFAP1L1Q8TED9 768 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 GJA10Q969M2 543 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 UPF3AQ9H1J1 476 aaKnown RBP20.92■□□□□ 0.94
CDC42-204ENST00000411827 MAGEF1Q9HAY2 307 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 STK17AQ9UEE5 414 aa20.92■□□□□ 0.94
CDC42-204ENST00000411827 DDX20Q9UHI6 824 aaKnown RBP20.92■□□□□ 0.94
CDC42-204ENST00000411827 EML1O00423 815 aa20.91■□□□□ 0.94
CDC42-204ENST00000411827 DYNC1LI2O43237 492 aaPredicted RBP20.91■□□□□ 0.94
CDC42-204ENST00000411827 GRIN1Q05586 938 aa20.91■□□□□ 0.94
CDC42-204ENST00000411827 PLPPR4Q7Z2D5 763 aa20.91■□□□□ 0.94
CDC42-204ENST00000411827 EMSYQ7Z589 1322 aa20.91■□□□□ 0.94
CDC42-204ENST00000411827 SMARCAD1Q9H4L7 1026 aa20.91■□□□□ 0.94
CDC42-204ENST00000411827 HPSEQ9Y251 543 aa20.91■□□□□ 0.94
CDC42-204ENST00000411827 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.9■□□□□ 0.94
CDC42-204ENST00000411827 LGR5O75473 907 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 TCF7P36402 384 aaPredicted RBP20.9■□□□□ 0.94
CDC42-204ENST00000411827 SYKP43405 635 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 HSDL1Q3SXM5 330 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 RRAGBQ5VZM2 374 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms