RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF577Q9BSK1 485 aa20.38■□□□□ 0.85
PDLIM2-206ENST00000409141 SH2B1Q9NRF2 756 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-206ENST00000409141 IPO5O00410 1097 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 SMIM10L2AP0DMW4 78 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 SMIM10L2BP0DMW5 78 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 ACTR2P61160 394 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 ZNF200P98182 395 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 BFSP2Q13515 415 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 NONOQ15233 471 aaKnown RBP eCLIP20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 KRT25Q7Z3Z0 450 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 CTAGE1Q96RT6 745 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 WNT8AQ9H1J5 351 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 CCDC194A0A1B0GVG4 234 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 C17orf102A2RUQ5 167 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 DDX39AO00148 427 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 EDIL3O43854 480 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 ST18O60284 1047 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 LRIT3Q3SXY7 679 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 CCDC155Q8N6L0 562 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 SCLYQ96I15 445 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 TBC1D32Q96NH3 1257 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 RNPEPQ9H4A4 650 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 SMARCAD1Q9H4L7 1026 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 AZI2Q9H6S1 392 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 TBC1D22BQ9NU19 505 aa20.37■□□□□ 0.85
PDLIM2-206ENST00000409141 DHX15O43143 795 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 ACRP10323 421 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 PTK7Q13308 1070 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 TRIM29Q14134 588 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 HIC1Q14526 733 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 C16orf59Q7L2K0 433 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 OXER1Q8TDS5 423 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 LLPHQ9BRT6 129 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 IL23AQ9NPF7 189 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 ERAP1Q9NZ08 941 aa20.36■□□□□ 0.85
PDLIM2-206ENST00000409141 PITPNM1O00562 1244 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 FOSBP53539 338 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 INF2Q27J81 1249 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 RPUSD2Q8IZ73 545 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 IL27Q8NEV9 243 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 CAGE1Q8TC20 777 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 ATP6V0A1Q93050 837 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.35■□□□□ 0.851e-6■■■■□ 19.3
PDLIM2-206ENST00000409141 BRMS1Q9HCU9 246 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 SETD4Q9NVD3 440 aa20.35■□□□□ 0.85
PDLIM2-206ENST00000409141 SOX1O00570 391 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 LGR5O75473 907 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 CCNE2O96020 404 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 GNAT1P11488 350 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 MARK3P27448 753 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 KRT2P35908 639 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 TMEM240Q5SV17 173 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 ZNF365Q70YC5 407 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 DHX38Q92620 1227 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 LENG9Q96B70 501 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 RNPC3Q96LT9 517 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 PCYT2Q99447 389 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 BACH2Q9BYV9 841 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 TCEAL9Q9UHQ7 104 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 EMSYQ7Z589 1322 aa20.34■□□□□ 0.85
PDLIM2-206ENST00000409141 CYP3A7-CYP3A51PA0A087WV96 503 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 MSH4O15457 936 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 ATG7O95352 703 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 TDP2O95551 362 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 IQCF3P0C7M6 154 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 CYP3A7P24462 503 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 STAT5BP51692 787 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 Q4G0T1 1027 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 KRT40Q6A162 431 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 PSRC1Q6PGN9 363 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 PIK3AP1Q6ZUJ8 805 aa20.33■□□□□ 0.85
PDLIM2-206ENST00000409141 BACH1O14867 736 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 TREHO43280 583 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 FGBP02675 491 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 MMP1P03956 469 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 HOXC8P31273 242 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 LETM2Q2VYF4 491 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 MIS18BP1Q6P0N0 1132 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 MOXD1Q6UVY6 613 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 ABHD15Q6UXT9 468 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 PLPPR4Q7Z2D5 763 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 DEFB128Q7Z7B8 93 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 SERINC5Q86VE9 423 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 AFAP1L1Q8TED9 768 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 LRCH3Q96II8 777 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 NRCAMQ92823 1304 aa20.32■□□□□ 0.84
PDLIM2-206ENST00000409141 CKBP12277 381 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 SELPP16109 830 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 RFC2P35250 354 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 KRT76Q01546 638 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 PPFIA1Q13136 1202 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 NR5A1Q13285 461 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 ZNF746Q6NUN9 644 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 NEK8Q86SG6 692 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 LMBR1Q8WVP7 490 aa20.31■□□□□ 0.84
PDLIM2-206ENST00000409141 IGKV6D-21A0A0A0MT36 114 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 HMGN5P82970 282 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 RBL2Q08999 1139 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 FAM160B1Q5W0V3 765 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 SWSAP1Q6NVH7 229 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms