RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TRAF7Q6Q0C0 670 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 HOMER1Q86YM7 354 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 IL31RAQ8NI17 732 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 RUFY2Q8WXA3 655 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 SUGCTQ9HAC7 445 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 MLXIPQ9HAP2 919 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 FAM186AA6NE01 2351 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 VPS13AQ96RL7 3174 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 RIF1Q5UIP0 2472 aaKnown RBP10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 COL4A6Q14031 1691 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 CYTH3O43739 400 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 GFRA3O60609 400 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 EFCAB14O75071 495 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 UBA1P22314 1058 aaKnown RBP10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 CHMLP26374 656 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 DEFB103AP81534 67 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 ZP2Q05996 745 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 TROAPQ12815 778 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 HIC1Q14526 733 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 WTAPQ15007 396 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 GPKOWQ92917 476 aaPredicted RBP eCLIP10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 WNT8BQ93098 351 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 RAD9AQ99638 391 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 C16orf70Q9BSU1 422 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 SENP2Q9HC62 589 aa10.61□□□□□ -0.71
NIF3L1-203ENST00000409129 MYH6P13533 1939 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 E7EWF7 191 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 LGR5O75473 907 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 GJB5O95377 273 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 TCF15Q12870 199 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 MBTPS1Q14703 1052 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 SART3Q15020 963 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 ASTLQ6HA08 431 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 RALYLQ86SE5 291 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 SERINC5Q86VE9 423 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 NCOA7Q8NI08 942 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 BCAS3Q9H6U6 928 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 LMCD1Q9NZU5 365 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 MUTYHQ9UIF7 546 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 TAF6LQ9Y6J9 622 aa10.6□□□□□ -0.71
NIF3L1-203ENST00000409129 EMSYQ7Z589 1322 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 C17orf102A2RUQ5 167 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 RSPH10B2B2RC85 870 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 SPATA31C2B4DYI2 1134 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 H3BRB1 525 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 STAM2O75886 525 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 RSPH10BP0C881 870 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 ICAM3P32942 547 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 IRS1P35568 1242 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 THPOP40225 353 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 ERVK-21P61565 698 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 GNPTABQ3T906 1256 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 CATIPQ7Z7H3 387 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 DBF4BQ8NFT6 615 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 IGDCC4Q8TDY8 1250 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 ATP6V0A1Q93050 837 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 TGS1Q96RS0 853 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 TUT1Q9H6E5 874 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 RALGAPA2Q2PPJ7 1873 aa10.59□□□□□ -0.71
NIF3L1-203ENST00000409129 MYH7BA7E2Y1 1941 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 LINC01553A4QN01 128 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 NOP56O00567 594 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 SGSM2O43147 1006 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 LGALS2P05162 132 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 SMIM10L2AP0DMW4 78 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 SMIM10L2BP0DMW5 78 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 C7P10643 843 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 HOXC8P31273 242 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 ANTXR2P58335 489 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 NEDD9Q14511 834 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 FAM117BQ6P1L5 589 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 EP400NLQ6ZTU2 488 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 NEK9Q8TD19 979 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 MAP4K1Q92918 833 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 INPP4AQ96PE3 977 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 MAP3K14Q99558 947 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 RNPEPQ9H4A4 650 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 RTEL1Q9NZ71 1219 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 INSL6Q9Y581 213 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 SUPT16HQ9Y5B9 1047 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 FRMPD4Q14CM0 1322 aa10.58□□□□□ -0.72
NIF3L1-203ENST00000409129 TREHO43280 583 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 FIBPO43427 364 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 AMHP03971 560 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 GNAT1P11488 350 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 SMARCA1P28370 1054 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 PLEKHG4Q58EX7 1191 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 METTL7BQ6UX53 244 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 MB21D2Q8IYB1 491 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 SMARCC2Q8TAQ2 1214 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
NIF3L1-203ENST00000409129 CUL5Q93034 780 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms