RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 H3BRB1 525 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 MAFGO15525 162 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 SLC34A2O95436 690 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 F2P00734 622 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 LGALS2P05162 132 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 ARP10275 920 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 KCNA2P16389 499 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 ZNF200P98182 395 aaPredicted RBP11.79□□□□□ -0.52
FAM49A-202ENST00000406434 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 TMEM240Q5SV17 173 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 ZNF365Q70YC5 407 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 C16orf59Q7L2K0 433 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 DEFB128Q7Z7B8 93 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
FAM49A-202ENST00000406434 CCDC148Q8NFR7 591 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 SEPT1Q8WYJ6 367 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
FAM49A-202ENST00000406434 C16orf70Q9BSU1 422 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 TUT1Q9H6E5 874 aaKnown RBP11.79□□□□□ -0.52
FAM49A-202ENST00000406434 IL23AQ9NPF7 189 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 HAS3O00219 553 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 PFKFB2O60825 505 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 CDKL5O76039 1030 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 DEXIO95424 95 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 FGBP02675 491 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 HOXD8P13378 290 aaPredicted RBP11.79□□□□□ -0.52
FAM49A-202ENST00000406434 SREBF1P36956 1147 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 BFSP2Q13515 415 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 IER5LQ5T953 404 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 SESTD1Q86VW0 696 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 PLA2G4DQ86XP0 818 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 TRIM50Q86XT4 487 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 TEX2Q8IWB9 1127 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 RPUSD2Q8IZ73 545 aaKnown RBP11.79□□□□□ -0.52
FAM49A-202ENST00000406434 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 WNT8AQ9H1J5 351 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 KCNH7Q9NS40 1196 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
FAM49A-202ENST00000406434 GSTTP1A0A1W2PQM5 241 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 MEIS1O00470 390 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 IQCF3P0C7M6 154 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 TCF7P36402 384 aaPredicted RBP11.78□□□□□ -0.52
FAM49A-202ENST00000406434 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 MCTP2Q6DN12 878 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 Q7L0L9 218 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 OTOP2Q7RTS6 562 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 GLG1Q92896 1179 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 SDF4Q9BRK5 362 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
FAM49A-202ENST00000406434 KAT6AQ92794 2004 aa11.78□□□□□ -0.52
FAM49A-202ENST00000406434 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 FAM86B1E9PN63 330 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 DDX39AO00148 427 aaKnown RBP11.77□□□□□ -0.53
FAM49A-202ENST00000406434 CYP3A4P08684 503 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 FAM86B2P0C5J1 330 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 SMIM10L2AP0DMW4 78 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 SMIM10L2BP0DMW5 78 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 MARK3P27448 753 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 HIC1Q14526 733 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 ME3Q16798 604 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 PSRC1Q6PGN9 363 aaPredicted RBP11.77□□□□□ -0.53
FAM49A-202ENST00000406434 ATP6V0A1Q93050 837 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 FTOQ9C0B1 505 aaKnown RBP eCLIP11.77□□□□□ -0.53
FAM49A-202ENST00000406434 RNPEPQ9H4A4 650 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 JPH1Q9HDC5 661 aaPredicted RBP11.77□□□□□ -0.53
FAM49A-202ENST00000406434 SETD4Q9NVD3 440 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 ORC3Q9UBD5 711 aaPredicted RBP11.77□□□□□ -0.53
FAM49A-202ENST00000406434 SLC9A2Q9UBY0 812 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 ZNF215Q9UL58 517 aaPredicted RBP11.77□□□□□ -0.53
FAM49A-202ENST00000406434 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
FAM49A-202ENST00000406434 SCN5AQ14524 2016 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 ZBBXA8MT70 800 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 TREHO43280 583 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 LARGE1O95461 756 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 PTK7Q13308 1070 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 ITGB3BPQ13352 177 aaPredicted RBP11.76□□□□□ -0.53
FAM49A-202ENST00000406434 PRR16Q569H4 304 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 DEFB123Q8N688 67 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 CAGE1Q8TC20 777 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
FAM49A-202ENST00000406434 IL17RAQ96F46 866 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 FAM161BQ96MY7 647 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 CTAGE1Q96RT6 745 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 C22orf23Q9BZE7 217 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 PCDHA4Q9UN74 947 aa11.76□□□□□ -0.53
FAM49A-202ENST00000406434 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
FAM49A-202ENST00000406434 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
FAM49A-202ENST00000406434 GRXCR1A8MXD5 290 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 GNAT1P11488 350 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 CKBP12277 381 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 SELPP16109 830 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 XBP1P17861 261 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms