RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ZNF568Q3ZCX4 644 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 USP50Q70EL3 339 aaPredicted RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 RFX6Q8HWS3 928 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 PCSK9Q8NBP7 692 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 FAM151AQ8WW52 585 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 GLT1D1Q96MS3 346 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 TEX13BQ9BXU2 312 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 COG7P83436 770 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 PPFIA1Q13136 1202 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 RHPN2Q8IUC4 686 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 ZNF560Q96MR9 790 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 MRPL4Q9BYD3 311 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 DPP7Q9UHL4 492 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 SERTAD1Q9UHV2 236 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 BZW2Q9Y6E2 419 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 SH2B2O14492 632 aaPredicted RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 HOXA2O43364 376 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 PRKAB2O43741 272 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 KPNA6O60684 536 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 PAK2Q13177 524 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 ORC2Q13416 577 aaPredicted RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 BSPRYQ5W0U4 402 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 LRRC31Q6UY01 552 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 FBF1Q8TES7 1133 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 IFT81Q8WYA0 676 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 RIC8AQ9NPQ8 531 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 PCDHB8Q9UN66 801 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 TADA2AO75478 443 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 TUBBP07437 444 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 PTGDRQ13258 359 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 SMARCAD1Q9H4L7 1026 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 LSM7Q9UK45 103 aaKnown RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 I3L4J1 428 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 NEMP1O14524 444 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 PLEKHH3Q7Z736 793 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 SCN4BQ8IWT1 228 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 TAB2Q9NYJ8 693 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 MOSPD1Q9UJG1 213 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 ANGPTL3Q9Y5C1 460 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 KCNJ18B7U540 433 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 KCNJ12Q14500 433 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 TMTC1Q8IUR5 882 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 NBPF26B4DH59 902 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 KIAA1755Q5JYT7 1200 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 RRAGAQ7L523 313 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 SEC62Q99442 399 aaKnown RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 PLA2G12BQ9BX93 195 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 CLDN3O15551 220 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 PPP2R5EQ16537 467 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 BZW1Q7L1Q6 419 aaKnown RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 CCDC105Q8IYK2 499 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 FAM186BQ8IYM0 893 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 KRT12Q99456 494 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 RRN3P2A6NIE6 340 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 CAMTA2O94983 1202 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 AFPP02771 609 aaKnown RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 RPS6KA1Q15418 735 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 MYSM1Q5VVJ2 828 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 BTBD8Q5XKL5 378 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 SYMPKQ92797 1274 aaKnown RBP8.63□□□□□ -1.03
USP47-203ENST00000399455 PLCB1Q9NQ66 1216 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 SLC9A2Q9UBY0 812 aa8.63□□□□□ -1.03
USP47-203ENST00000399455 HOXC6P09630 235 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SUPT20HL2P0C7V6 817 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 CCDC15Q0P6D6 951 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SF3B3Q15393 1217 aaKnown RBP8.62□□□□□ -1.03
USP47-203ENST00000399455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.62□□□□□ -1.03
USP47-203ENST00000399455 LZTFL1Q9NQ48 299 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
USP47-203ENST00000399455 NRXN1Q9ULB1 1477 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 C17orf102A2RUQ5 167 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 LMNB2Q03252 620 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 EXOC3L4Q17RC7 722 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 COL23A1Q86Y22 540 aaPredicted RBP8.62□□□□□ -1.03
USP47-203ENST00000399455 GDAP1Q8TB36 358 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 CDKL2Q92772 493 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 HTATIP2Q9BUP3 242 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 MCAMP43121 646 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 DRP2Q13474 957 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 ZNF667Q5HYK9 610 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 BBOF1Q8ND07 529 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 ZSWIM6Q9HCJ5 1215 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.62□□□□□ -1.03
USP47-203ENST00000399455 ST8SIA6P61647 398 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 PPP4R3CPQ6ZMV5 832 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 GJA10Q969M2 543 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 CCDC51Q96ER9 411 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 RAB17Q9H0T7 212 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SLC38A7Q9NVC3 462 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 GDAQ9Y2T3 454 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SPDYE2BA6NHP3 402 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 MAGEB2O15479 319 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SPDYE6P0CI01 402 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SETDB1Q15047 1291 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SCYL3Q8IZE3 742 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms