RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TMEM60Q9H2L4 133 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 EMILIN3Q9NT22 766 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 ANKFY1Q9P2R3 1169 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 TJP3O95049 919 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 PLA2G4BP0C869 781 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 BMP3P12645 472 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 TAC1P20366 129 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 RFC1P35251 1148 aaPredicted RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 C2orf54Q08AI8 447 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 GADL1Q6ZQY3 521 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 RAPH1Q70E73 1250 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 KCTD6Q8NC69 237 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 NRBF2Q96F24 287 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 FAM167AQ96KS9 214 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 FAF1Q9UNN5 650 aaPredicted RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 ANGPTL3Q9Y5C1 460 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 MAD1L1Q9Y6D9 718 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 SKIP12755 728 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 RWDD2BP57060 319 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 NNTQ13423 1086 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 TMED2Q15363 201 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 BSPRYQ5W0U4 402 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 DEPDC1BQ8WUY9 529 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 DISC1Q9NRI5 854 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 SCOCQ9UIL1 159 aa9.02□□□□□ -0.96
SPTLC3-201ENST00000399002 DPCR1Q3MIW9 517 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 KAZNQ674X7 775 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 DGKHQ86XP1 1220 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 TLK1Q9UKI8 766 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 TTLL3Q9Y4R7 772 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 CDHR2Q9BYE9 1310 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 RASGRF2O14827 1237 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 ANXA13P27216 316 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 CCT5P48643 541 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 INPP1P49441 399 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 KLHL38Q2WGJ6 581 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 DARS2Q6PI48 645 aaKnown RBP9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 ARMCX2Q7L311 632 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 NCAPG2Q86XI2 1143 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 CENPKQ9BS16 269 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 BSDC1Q9NW68 430 aaPredicted RBP9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 MYO3BQ8WXR4 1341 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 CAMSAP1Q5T5Y3 1602 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 MOCS3O95396 460 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 NR1D1P20393 614 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 ZNF827Q17R98 1081 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 GIPC2Q8TF65 315 aa9.02□□□□□ -0.97
SPTLC3-201ENST00000399002 TCP10L2B9ZVM9 353 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 GSTA4O15217 222 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 PRPSAP2O60256 369 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 CHEK2O96017 543 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 CIITAP33076 1130 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 BIRC2Q13490 618 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 TRIM68Q6AZZ1 485 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 ELMSAN1Q6PJG2 1045 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 MICAL1Q8TDZ2 1067 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 NDST4Q9H3R1 872 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 STRIP2Q9ULQ0 834 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 PVALEFA0A1B0GWK0 134 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 NECTIN1Q15223 517 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 FSCBQ5H9T9 825 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 PDZD8Q8NEN9 1154 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 FMO2Q99518 471 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 PTPN22Q9Y2R2 807 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 KDM6BO15054 1643 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 GOLGA8HP0CJ92 632 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 AP3M2P53677 418 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 NBPF9Q3BBW0 867 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 AP1ARQ63HQ0 302 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 FOXP4Q8IVH2 680 aaPredicted RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 PI4K2BQ8TCG2 481 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 NDE1Q9NXR1 346 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 LOC102724428A0A0B4J2F2 783 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 POC1B-GALNT4F8VUJ3 575 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 EIF3DO15371 548 aaKnown RBP eCLIP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 CALB1P05937 261 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 ADORA1P30542 326 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 SIK1P57059 783 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 PPP2R5CQ13362 524 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 ADCK5Q3MIX3 580 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 DPY19L2Q6NUT2 758 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 RNF207Q6ZRF8 634 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 NDUFAF2Q8N183 169 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 GJA10Q969M2 543 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 EDC3Q96F86 508 aaKnown RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 AP5M1Q9H0R1 490 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 UBE2TQ9NPD8 197 aaPredicted RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 LIG3P49916 1009 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 TAP1Q03518 808 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 DHX9Q08211 1270 aaKnown RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 FAM133AQ8N9E0 248 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 COA1Q9GZY4 146 aa9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 SPATS2LQ9NUQ6 558 aaKnown RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 DDX56Q9NY93 547 aaKnown RBP9.01□□□□□ -0.97
SPTLC3-201ENST00000399002 CLTAP09496 248 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms