RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
TFF3-202ENST00000398431 KAT6AQ92794 2004 aa13.89□□□□□ -0.19
TFF3-202ENST00000398431 GSTTP1A0A1W2PQM5 241 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 GNAT1P11488 350 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 ARHGAP4P98171 946 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 GPM6BQ13491 265 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 COL19A1Q14993 1142 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 RUFY4Q6ZNE9 571 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 CATIPQ7Z7H3 387 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
TFF3-202ENST00000398431 RPAINQ86UA6 219 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 ZNF654Q8IZM8 581 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
TFF3-202ENST00000398431 BANK1Q8NDB2 785 aa13.88□□□□□ -0.19
TFF3-202ENST00000398431 FAM86C2PA6NEL3 165 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 KCNA2P16389 499 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 ITGB5P18084 799 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
TFF3-202ENST00000398431 SP4Q02446 784 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 MGAT3Q09327 533 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 SART3Q15020 963 aaKnown RBP13.87□□□□□ -0.19
TFF3-202ENST00000398431 TCEAL5Q5H9L2 206 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 PTCRAQ6ISU1 281 aaPredicted RBP13.87□□□□□ -0.19
TFF3-202ENST00000398431 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 GJD3Q8N144 294 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 SMARCC2Q8TAQ2 1214 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 APBB2Q92870 758 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 YME1L1Q96TA2 773 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 IFIH1Q9BYX4 1025 aaKnown RBP13.87□□□□□ -0.19
TFF3-202ENST00000398431 NRCAMQ92823 1304 aa13.87□□□□□ -0.19
TFF3-202ENST00000398431 COL4A6Q14031 1691 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 H3BQ06 376 aaPredicted RBP13.86□□□□□ -0.19
TFF3-202ENST00000398431 ENPP3O14638 875 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 TCF7P36402 384 aaPredicted RBP13.86□□□□□ -0.19
TFF3-202ENST00000398431 LTBRP36941 435 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 LPIN1Q14693 890 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 PTPROQ16827 1216 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 MARCH8Q5T0T0 291 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 NLRX1Q86UT6 975 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
TFF3-202ENST00000398431 SEPT1Q8WYJ6 367 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 RRP36Q96EU6 259 aaKnown RBP13.86□□□□□ -0.19
TFF3-202ENST00000398431 IL17RAQ96F46 866 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
TFF3-202ENST00000398431 RBM8AQ9Y5S9 174 aaKnown RBP13.86□□□□□ -0.19
TFF3-202ENST00000398431 UBIAD1Q9Y5Z9 338 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 NLRC5Q86WI3 1866 aa13.86□□□□□ -0.19
TFF3-202ENST00000398431 TTC3P53804 2025 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 MBLAC1A4D2B0 266 aaPredicted RBP13.85□□□□□ -0.19
TFF3-202ENST00000398431 C5orf67F2Z3F1 127 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 DDAH1O94760 285 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 GHRP10912 638 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 RTN4RL1Q86UN2 441 aaPredicted RBP13.85□□□□□ -0.19
TFF3-202ENST00000398431 GIMAP8Q8ND71 665 aaPredicted RBP13.85□□□□□ -0.19
TFF3-202ENST00000398431 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
TFF3-202ENST00000398431 CUL5Q93034 780 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
TFF3-202ENST00000398431 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 PABPC5Q96DU9 382 aaKnown RBP13.85□□□□□ -0.19
TFF3-202ENST00000398431 PCYT2Q99447 389 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 MTA3Q9BTC8 594 aa13.85□□□□□ -0.19
TFF3-202ENST00000398431 ZNF215Q9UL58 517 aaPredicted RBP13.85□□□□□ -0.19
TFF3-202ENST00000398431 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 GRM6O15303 877 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 PRC1O43663 620 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 RB1P06400 928 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 KIF5BP33176 963 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 BMPR1AP36894 532 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 CTC1Q2NKJ3 1217 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 PUS10Q3MIT2 529 aaKnown RBP13.84□□□□□ -0.19
TFF3-202ENST00000398431 TIGD5Q53EQ6 642 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 TAF2Q6P1X5 1199 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 CRIPAKQ8N1N5 446 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 FIBCD1Q8N539 461 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 DNAJB3Q8WWF6 145 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 LZTS2Q9BRK4 669 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 NSUN3Q9H649 340 aaKnown RBP13.84□□□□□ -0.19
TFF3-202ENST00000398431 PSTPIP2Q9H939 334 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
TFF3-202ENST00000398431 RALGAPA2Q2PPJ7 1873 aa13.84□□□□□ -0.19
TFF3-202ENST00000398431 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 SH2B2O14492 632 aaPredicted RBP13.83□□□□□ -0.2
TFF3-202ENST00000398431 RXRAP19793 462 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 MARK3P27448 753 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 GNAQP50148 359 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 DLX2Q07687 328 aaPredicted RBP13.83□□□□□ -0.2
TFF3-202ENST00000398431 PPFIA1Q13136 1202 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 CAMK1Q14012 370 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 GRIK4Q16099 956 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 UBE2SQ16763 222 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 FBXO47Q5MNV8 452 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 TMTC2Q8N394 836 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
TFF3-202ENST00000398431 CLP1Q92989 425 aaKnown RBP13.83□□□□□ -0.2
TFF3-202ENST00000398431 LSG1Q9H089 658 aaKnown RBP13.83□□□□□ -0.2
TFF3-202ENST00000398431 JADE2Q9NQC1 790 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms