RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 MTMR8Q96EF0 704 aa11.39□□□□□ -0.59
NIFKP1-201ENST00000398317 SLC9A7Q96T83 725 aa11.39□□□□□ -0.59
NIFKP1-201ENST00000398317 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
NIFKP1-201ENST00000398317 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
NIFKP1-201ENST00000398317 HDAC6Q9UBN7 1215 aa11.39□□□□□ -0.59
NIFKP1-201ENST00000398317 BRWD1Q9NSI6 2320 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 RNF223E7ERA6 249 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 ZBTB5O15062 677 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 RGS20O76081 388 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 ZNF200P98182 395 aaPredicted RBP11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 TRDNQ13061 729 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 GPNMBQ14956 572 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 KRT40Q6A162 431 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 TMCO2Q7Z6W1 182 aaPredicted RBP11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 HERC6Q8IVU3 1022 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 DHX37Q8IY37 1157 aaKnown RBP11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 IL31RAQ8NI17 732 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 CAGE1Q8TC20 777 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 PHOSPHO2Q8TCD6 241 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 ARNTL2Q8WYA1 636 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 EMID1Q96A84 441 aaPredicted RBP11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 ASB2Q96Q27 587 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 PIGSQ96S52 555 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 PDCD2LQ9BRP1 358 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 GTF2IRD1Q9UHL9 959 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 SUPT16HQ9Y5B9 1047 aaKnown RBP11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 PCDHA1Q9Y5I3 950 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
NIFKP1-201ENST00000398317 KAT6AQ92794 2004 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 CYP21A2P08686 494 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 CKBP12277 381 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 SELPP16109 830 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 CHMLP26374 656 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 USP46P62068 366 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 MRPS5P82675 430 aaKnown RBP11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 SP2Q02086 613 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 TAP1Q03518 808 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 GRM4Q14833 912 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 KIAA0753Q2KHM9 967 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 TCTN1Q2MV58 587 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 STOX1Q6ZVD7 989 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 LRRC8DQ7L1W4 858 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 SPRED2Q7Z698 418 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 FCHSD1Q86WN1 690 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 C7orf31Q8N865 590 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 PPTC7Q8NI37 304 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 AFAP1L1Q8TED9 768 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 PIBF1Q8WXW3 757 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 GPKOWQ92917 476 aaPredicted RBP eCLIP11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 WNT8BQ93098 351 aa11.37□□□□□ -0.59
NIFKP1-201ENST00000398317 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 GCOM1H8Y6P7 765 aaPredicted RBP11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 HAS3O00219 553 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 CYTH3O43739 400 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 NBNO60934 754 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 BAIAP3O94812 1187 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 GGPS1O95749 300 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 F2P00734 622 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 POLR2MP0CAP2 368 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 KCNJ6P48051 423 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 WDR5P61964 334 aaKnown RBP11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 IRX6P78412 446 aaPredicted RBP11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 DEFB103AP81534 67 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 GHRHRQ02643 423 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 TFF2Q03403 129 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 WTAPQ15007 396 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 PGM5Q15124 567 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 SKIV2LQ15477 1246 aaKnown RBP11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 CELF3Q5SZQ8 465 aaKnown RBP11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 BRICD5Q6PL45 260 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 VSIG10LQ86VR7 867 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 FAM160A2Q8N612 972 aaPredicted RBP11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 ADAMTS19Q8TE59 1207 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 RUFY2Q8WXA3 655 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 KATNAL1Q9BW62 490 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 BCAS3Q9H6U6 928 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 RIOX1Q9H6W3 641 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 MTCH2Q9Y6C9 303 aa11.36□□□□□ -0.59
NIFKP1-201ENST00000398317 ERICH2A1L162 156 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 LCHNA4D1U4 455 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 E7EWF7 191 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 UBA1P22314 1058 aaKnown RBP11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 CCND2P30279 289 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 GGCXP38435 758 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 PTK7Q13308 1070 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 TRIM71Q2Q1W2 868 aaKnown RBP11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 HSDL1Q3SXM5 330 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 ZNF618Q5T7W0 954 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 CNKSR3Q6P9H4 555 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 RALYLQ86SE5 291 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms