RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SP4Q02446 784 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 TRIM71Q2Q1W2 868 aaKnown RBP19.03■□□□□ 0.64
APTR-201ENST00000398043 C7orf31Q8N865 590 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 SEPT1Q8WYJ6 367 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 LENG9Q96B70 501 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 PCYT2Q99447 389 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 C22orf23Q9BZE7 217 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 IL23AQ9NPF7 189 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 PKD2L1Q9P0L9 805 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 LGR5O75473 907 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 ATG7O95352 703 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 ADAM17P78536 824 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 GALNT17Q6IS24 598 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 GPR153Q6NV75 609 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 PLA2G4DQ86XP0 818 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 BLIDQ8IZY5 108 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
APTR-201ENST00000398043 WNT8BQ93098 351 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 SCLYQ96I15 445 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 JPH1Q9HDC5 661 aaPredicted RBP19.02■□□□□ 0.64
APTR-201ENST00000398043 GJB4Q9NTQ9 266 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 SLC9A2Q9UBY0 812 aa19.02■□□□□ 0.64
APTR-201ENST00000398043 SMIM10L2AP0DMW4 78 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 SMIM10L2BP0DMW5 78 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 ACRP10323 421 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 PTK7Q13308 1070 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 GPNMBQ14956 572 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 ZNF365Q70YC5 407 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 CAGE1Q8TC20 777 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 RNPEPQ9H4A4 650 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 ORC3Q9UBD5 711 aaPredicted RBP19.01■□□□□ 0.63
APTR-201ENST00000398043 KCNJ14Q9UNX9 436 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 MICAL3Q7RTP6 2002 aa19.01■□□□□ 0.63
APTR-201ENST00000398043 EMSYQ7Z589 1322 aa19■□□□□ 0.63
APTR-201ENST00000398043 CCNE2O96020 404 aa19■□□□□ 0.63
APTR-201ENST00000398043 IQCF3P0C7M6 154 aa19■□□□□ 0.63
APTR-201ENST00000398043 ZNF76P36508 570 aa19■□□□□ 0.63
APTR-201ENST00000398043 USP11P51784 963 aa19■□□□□ 0.63
APTR-201ENST00000398043 ACTR2P61160 394 aa19■□□□□ 0.63
APTR-201ENST00000398043 BFSP2Q13515 415 aa19■□□□□ 0.63
APTR-201ENST00000398043 UTP14CQ5TAP6 766 aaKnown RBP19■□□□□ 0.63
APTR-201ENST00000398043 TRAF7Q6Q0C0 670 aa19■□□□□ 0.63
APTR-201ENST00000398043 SERINC5Q86VE9 423 aa19■□□□□ 0.63
APTR-201ENST00000398043 LIMCH1Q9UPQ0 1083 aa19■□□□□ 0.63
APTR-201ENST00000398043 IGKV6D-21A0A0A0MT36 114 aa18.99■□□□□ 0.63
APTR-201ENST00000398043 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
APTR-201ENST00000398043 TBCKQ8TEA7 893 aa18.99■□□□□ 0.63
APTR-201ENST00000398043 HERVK_113Q902F9 699 aa18.99■□□□□ 0.63
APTR-201ENST00000398043 RNPC3Q96LT9 517 aaKnown RBP18.99■□□□□ 0.63
APTR-201ENST00000398043 SDF4Q9BRK5 362 aa18.99■□□□□ 0.63
APTR-201ENST00000398043 ZNF215Q9UL58 517 aaPredicted RBP18.99■□□□□ 0.63
APTR-201ENST00000398043 NOD1Q9Y239 953 aa18.99■□□□□ 0.63
APTR-201ENST00000398043 CYP3A7-CYP3A51PA0A087WV96 503 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 C17orf102A2RUQ5 167 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 IPO5O00410 1097 aaKnown RBP18.98■□□□□ 0.63
APTR-201ENST00000398043 TREHO43280 583 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 JAK2O60674 1132 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 CKBP12277 381 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 CYP3A7P24462 503 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 PRR16Q569H4 304 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 PSRC1Q6PGN9 363 aaPredicted RBP18.98■□□□□ 0.63
APTR-201ENST00000398043 OXER1Q8TDS5 423 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 AFAP1L1Q8TED9 768 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 MBOAT7Q96N66 472 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 SMARCAD1Q9H4L7 1026 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 SETD4Q9NVD3 440 aa18.98■□□□□ 0.63
APTR-201ENST00000398043 FGBP02675 491 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 PFKMP08237 780 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 RFC2P35250 354 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 SMAD3P84022 425 aaKnown RBP18.97■□□□□ 0.63
APTR-201ENST00000398043 ABHD15Q6UXT9 468 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 RPUSD2Q8IZ73 545 aaKnown RBP18.97■□□□□ 0.63
APTR-201ENST00000398043 CCDC155Q8N6L0 562 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 LMBR1Q8WVP7 490 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 WASF1Q92558 559 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 TNFRSF25Q93038 417 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 ZNF577Q9BSK1 485 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 ERAP1Q9NZ08 941 aa18.97■□□□□ 0.63
APTR-201ENST00000398043 MSH4O15457 936 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 SELPP16109 830 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 MBTPS1Q14703 1052 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 Q4G0T1 1027 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 FAM109BQ6ICB4 259 aaPredicted RBP18.96■□□□□ 0.63
APTR-201ENST00000398043 MOXD1Q6UVY6 613 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 LRRC8DQ7L1W4 858 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 PLPPR4Q7Z2D5 763 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 KRT25Q7Z3Z0 450 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 RETREG2Q8NC44 543 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 UIMC1Q96RL1 719 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 TBC1D22BQ9NU19 505 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 CXXC1Q9P0U4 656 aaPredicted RBP18.96■□□□□ 0.63
APTR-201ENST00000398043 NRCAMQ92823 1304 aa18.96■□□□□ 0.63
APTR-201ENST00000398043 MBLAC1A4D2B0 266 aaPredicted RBP18.95■□□□□ 0.62
APTR-201ENST00000398043 DDX39AO00148 427 aaKnown RBP18.95■□□□□ 0.62
APTR-201ENST00000398043 TDP2O95551 362 aa18.95■□□□□ 0.62
APTR-201ENST00000398043 XBP1P17861 261 aa18.95■□□□□ 0.62
APTR-201ENST00000398043 NONOQ15233 471 aaKnown RBP eCLIP18.95■□□□□ 0.62
APTR-201ENST00000398043 EARS2Q5JPH6 523 aaKnown RBP18.95■□□□□ 0.62
APTR-201ENST00000398043 MARCH8Q5T0T0 291 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms