RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.25
SOCS6-201ENST00000397942 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
SOCS6-201ENST00000397942 COL15A1P39059 1388 aa13.52□□□□□ -0.25
SOCS6-201ENST00000397942 A0A087WUV0 522 aaPredicted RBP13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CCDC188H7C350 402 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 NR1D1P20393 614 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 HSPA1LP34931 641 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CTTNQ14247 550 aaKnown RBP13.51□□□□□ -0.25
SOCS6-201ENST00000397942 PPP1R12CQ9BZL4 782 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 TECPR2O15040 1411 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 F5H6K3 240 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 MMP10P09238 476 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 TMOD1P28289 359 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 ATP11AP98196 1134 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 KLRC3Q07444 240 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 ZNF354CQ86Y25 554 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 VPS52Q8N1B4 723 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 ARHGEF2Q92974 986 aaKnown RBP13.51□□□□□ -0.25
SOCS6-201ENST00000397942 UBE2TQ9NPD8 197 aaPredicted RBP13.51□□□□□ -0.25
SOCS6-201ENST00000397942 PALMO75781 387 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 NEDD9Q14511 834 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 SPATA4Q8NEY3 305 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 ATP6V0A1Q93050 837 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 HOOK2Q96ED9 719 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CEP63Q96MT8 703 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 FGGP02679 453 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 SLCO1A2P46721 670 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 C10orf76Q5T2E6 689 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 LGSNQ5TDP6 509 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 NFRKBQ6P4R8 1299 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CAPN11Q9UMQ6 739 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 NOVA2Q9UNW9 492 aaKnown RBP13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CEP152O94986 1710 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 HSPA6P17066 643 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 MFAP3P55082 362 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 CYP4F22Q6NT55 531 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 COG1Q8WTW3 980 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 SLC7A3Q8WY07 619 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 IVNS1ABPQ9Y6Y0 642 aa13.51□□□□□ -0.25
SOCS6-201ENST00000397942 H0YCG3 227 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 SORBS3O60504 671 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 USP14P54578 494 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 SNAP25P60880 206 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 CNTRLQ7Z7A1 2325 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 RNF8O76064 485 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 ARL1P40616 181 aaPredicted RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 IRX3P78415 501 aaPredicted RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 TAB3Q8N5C8 712 aaPredicted RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 TACO1Q9BSH4 297 aaKnown RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 EDEM3Q9BZQ6 932 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 GFPT1Q06210 699 aaPredicted RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 CASC4Q6P4E1 433 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 GSPT2Q8IYD1 628 aaKnown RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 AKR1B1P15121 316 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 GBP1P32455 592 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 DPYDQ12882 1025 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 RASGRP2Q7LDG7 609 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
SOCS6-201ENST00000397942 TNS3Q68CZ2 1445 aa13.5□□□□□ -0.25
SOCS6-201ENST00000397942 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 ATP1A1P05023 1023 aaKnown RBP13.49□□□□□ -0.25
SOCS6-201ENST00000397942 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 RASA3Q14644 834 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 CFAP157Q5JU67 520 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 TTC16Q8NEE8 873 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 FAM20AQ96MK3 541 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 OSBPL9Q96SU4 736 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 CEP72Q9P209 647 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 STK38LQ9Y2H1 464 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 TMEM191BP0C7N4 346 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 MAPK4P31152 587 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
SOCS6-201ENST00000397942 BFSP1Q12934 665 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 AP3B2Q13367 1082 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 NFIXQ14938 502 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 PODNQ7Z5L7 613 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 P3H4Q92791 437 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 DDX47Q9H0S4 455 aaKnown RBP13.49□□□□□ -0.25
SOCS6-201ENST00000397942 TDRD3Q9H7E2 651 aaKnown RBP13.49□□□□□ -0.25
SOCS6-201ENST00000397942 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
SOCS6-201ENST00000397942 TYW1Q9NV66 732 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms