RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 UBE2SQ16763 222 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 BMP2KLQ5H9B9 411 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 SGMS1Q86VZ5 419 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 TELO2Q9Y4R8 837 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 NRCAMQ92823 1304 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 SIP14410 1827 aa16.38■□□□□ 0.21
SNRNP25-203ENST00000397876 KCNA2P16389 499 aa16.38■□□□□ 0.21
SNRNP25-203ENST00000397876 ITGB5P18084 799 aa16.38■□□□□ 0.21
SNRNP25-203ENST00000397876 KCNQ1P51787 676 aa16.38■□□□□ 0.21
SNRNP25-203ENST00000397876 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
SNRNP25-203ENST00000397876 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
SNRNP25-203ENST00000397876 NCOR1O75376 2440 aa16.38■□□□□ 0.21
SNRNP25-203ENST00000397876 ATP9AO75110 1047 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 BMP1P13497 986 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 ADAM17P78536 824 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 HTRA4P83105 476 aaPredicted RBP16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 PPFIA1Q13136 1202 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 TAF2Q6P1X5 1199 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 CENPQQ7L2Z9 268 aaPredicted RBP16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 SEPT1Q8WYJ6 367 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 APBB2Q92870 758 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 HLA-CQ95604 372 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 SUGCTQ9HAC7 445 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 ERAP1Q9NZ08 941 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 PKD2L1Q9P0L9 805 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 PCDHA6Q9UN73 950 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 PCDHA8Q9Y5H6 950 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 UBIAD1Q9Y5Z9 338 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
SNRNP25-203ENST00000397876 REV3LO60673 3130 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 RBAK-RBAKDNI3L0D1 243 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 MAFGO15525 162 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 NAPAP54920 295 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 FAM26DQ5JW98 314 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 PPP1R18Q6NYC8 613 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 RSPH3Q86UC2 560 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 TEX2Q8IWB9 1127 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 FBXO22Q8NEZ5 403 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 GLG1Q92896 1179 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 IFIH1Q9BYX4 1025 aaKnown RBP16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 JADE2Q9NQC1 790 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 BDP1A6H8Y1 2624 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 MUC3AQ02505 3323 aa16.36■□□□□ 0.21
SNRNP25-203ENST00000397876 COL4A6Q14031 1691 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 ZBTB43O43298 467 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 MARK3P27448 753 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 GRIK4Q16099 956 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 RTN1Q16799 776 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 WWC2Q6AWC2 1192 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 TOP1MTQ969P6 601 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 SAMD11Q96NU1 681 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 NECAB3Q96P71 396 aaPredicted RBP16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 C17orf80Q9BSJ5 609 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 SMARCAD1Q9H4L7 1026 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 JPH1Q9HDC5 661 aaPredicted RBP16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 TUBE1Q9UJT0 475 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 TCF20Q9UGU0 1960 aaKnown RBP16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 KAT6AQ92794 2004 aa16.35■□□□□ 0.21
SNRNP25-203ENST00000397876 hCG_1984214I3L0E3 225 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 UPP2O95045 317 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 ADCY7P51828 1080 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 KRT32Q14532 448 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 RUFY4Q6ZNE9 571 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 DHX32Q7L7V1 743 aaKnown RBP16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 RPAINQ86UA6 219 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 ZNF713Q8N859 430 aaPredicted RBP16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 TCEANC2Q96MN5 208 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 OSBPL7Q9BZF2 842 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
SNRNP25-203ENST00000397876 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 GOLGA8AA7E2F4 631 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 CDC45O75419 566 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 FOSP01100 380 aaPredicted RBP16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 RPLP2P05387 115 aaKnown RBP16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 GHRP10912 638 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 SKAP1Q86WV1 359 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 MXRA8Q9BRK3 442 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 SDF4Q9BRK5 362 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 AZI2Q9H6S1 392 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 KCNH7Q9NS40 1196 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 SLC9A2Q9UBY0 812 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 XIRP2A4UGR9 3374 aa16.33■□□□□ 0.2
SNRNP25-203ENST00000397876 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 MBLAC1A4D2B0 266 aaPredicted RBP16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 RRN3P2A6NIE6 340 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 CHRNA1P02708 482 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 IGBP1P78318 339 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 EXOSC10Q01780 885 aaKnown RBP16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 PTPROQ16827 1216 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 TSGA10IPQ3SY00 556 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 EPC2Q52LR7 807 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 TYW1BQ6NUM6 668 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms