RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SPDYE1Q8NFV5 336 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 HDAC7Q8WUI4 952 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 CALML4Q96GE6 196 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 MMTAG2Q9BU76 263 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 FGFBP2Q9BYJ0 223 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 EPN3Q9H201 632 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 KCNQ5Q9NR82 932 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 POLLQ9UGP5 575 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 CAPN6Q9Y6Q1 641 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 COL16A1Q07092 1604 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 PDE2AO00408 941 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 ZNF263O14978 683 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 AKR1B10O60218 316 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 RHOBTB3O94955 611 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 DNM2P50570 870 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 CKAP4Q07065 602 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 IFT88Q13099 833 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 GRAPQ13588 217 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 KCNB1Q14721 858 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 SLC5A9Q2M3M2 681 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 SLC10A5Q5PT55 438 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 PRR5LQ6MZQ0 368 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 SV2BQ7L1I2 683 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 FUKQ8N0W3 1084 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 GRAPLQ8TC17 118 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 ZNF507Q8TCN5 953 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 ZNF473Q8WTR7 871 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 CCDC47Q96A33 483 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 ZMYND12Q9H0C1 365 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 LRRC4BQ9NT99 713 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 FAM184BQ9ULE4 1060 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 TPX2Q9ULW0 747 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 PACSIN2Q9UNF0 486 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 COL14A1Q05707 1796 aaKnown RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 ITIH6Q6UXX5 1313 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 LRRC53A6NM62 1247 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 ENO4A6NNW6 628 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 E9PMD0 336 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 MEIS1O00470 390 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 KRT86O43790 486 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 EPB41P11171 864 aaKnown RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 GNA11P29992 359 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 STAT3P40763 770 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 GNAQP50148 359 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 RAB27AP51159 221 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 RASSF7Q02833 373 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 KIF5AQ12840 1032 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 SLMAPQ14BN4 828 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 MIIPQ5JXC2 388 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 IQCEQ6IPM2 695 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 NFRKBQ6P4R8 1299 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 CCNI2Q6ZMN8 369 aaPredicted RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 CACNA2D4Q7Z3S7 1137 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 ZSCAN29Q8IWY8 852 aaPredicted RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 LARP4BQ92615 738 aaKnown RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 DDX12PQ92771 950 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 CCDC51Q96ER9 411 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.51□□□□□ -1.53
SSR1-202ENST00000397511 IFIH1Q9BYX4 1025 aaKnown RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 BCAS3Q9H6U6 928 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 GGA1Q9UJY5 639 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 CAPN11Q9UMQ6 739 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 PDS5AQ29RF7 1337 aaKnown RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 USP17L10C9JJH3 530 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 G3V3G9 751 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 TRAF5O00463 557 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 BUB1BO60566 1050 aaPredicted RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 HSF2BPO75031 334 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 CCNE1P24864 410 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 EEF1GP26641 437 aaKnown RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 IKQ13123 557 aaPredicted RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 GRB10Q13322 594 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 SPA17Q15506 151 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 USH1GQ495M9 461 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 DCAF8Q5TAQ9 597 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 DRAXINQ8NBI3 349 aaPredicted RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 MS4A14Q96JA4 679 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 SPAG5Q96R06 1193 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 NDST4Q9H3R1 872 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 GOLPH3Q9H4A6 298 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 DDX4Q9NQI0 724 aaKnown RBP5.51□□□□□ -1.53
SSR1-202ENST00000397511 ARHGAP20Q9P2F6 1191 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 RPS6KL1Q9Y6S9 549 aa5.51□□□□□ -1.53
SSR1-202ENST00000397511 ESYT3A0FGR9 886 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 LDHCP07864 332 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SRGNP10124 158 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 LSP1P33241 339 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 CYLC1P35663 651 aaPredicted RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 EIF4A3P38919 411 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 GSTO1P78417 241 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 AMPD2Q01433 879 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 NFIAQ12857 509 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 CCDC181Q5TID7 509 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 ALS2CLQ60I27 953 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 BARGINQ6ZT62 677 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SND1Q7KZF4 910 aaKnown RBP eCLIP5.5□□□□□ -1.537e-8■■■□□ 15.4
SSR1-202ENST00000397511 TAX1BP1Q86VP1 789 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 FAM228AQ86W67 206 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 ZFPM1Q8IX07 1006 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 ADGRF4Q8IZF3 695 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms