RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SPATA31C1P0DKV0 1188 aa23.75■■□□□ 1.39
CPNE1-204ENST00000397443 PTGS1P23219 599 aa23.75■■□□□ 1.39
CPNE1-204ENST00000397443 SOCS4Q8WXH5 440 aa23.75■■□□□ 1.39
CPNE1-204ENST00000397443 PAGE5Q96GU1 130 aa23.75■■□□□ 1.39
CPNE1-204ENST00000397443 LOC102724159A0A0B4J2E5 919 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 CTAGE5O15320 804 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 KRT76Q01546 638 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 KIF22Q14807 665 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 POSTNQ15063 836 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 PWP2Q15269 919 aaKnown RBP23.74■■□□□ 1.39
CPNE1-204ENST00000397443 USP6NLQ92738 828 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 SLC9A2Q9UBY0 812 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 TSKSQ9UJT2 592 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 ZHX1Q9UKY1 873 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-204ENST00000397443 GABRQQ9UN88 632 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 E9PMD0 336 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 GGPS1O95749 300 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 RPA1P27694 616 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 C1QTNF8P60827 252 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 EPHA7Q15375 998 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 TMEM119Q4V9L6 283 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 MAMDC4Q6UXC1 1216 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 TRMT1LQ7Z2T5 733 aaKnown RBP23.74■■□□□ 1.39
CPNE1-204ENST00000397443 APBA2Q99767 749 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 BLZF1Q9H2G9 400 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 USP25Q9UHP3 1055 aa23.74■■□□□ 1.39
CPNE1-204ENST00000397443 SLITRK3O94933 977 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 LETM1O95202 739 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-204ENST00000397443 SSBP05455 408 aaKnown RBP eCLIP23.73■■□□□ 1.39
CPNE1-204ENST00000397443 TXNP10599 105 aaKnown RBP23.73■■□□□ 1.39
CPNE1-204ENST00000397443 CYP2C19P33261 490 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 MCM6Q14566 821 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 PRAMEF19Q5SWL8 479 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 KANK3Q6NY19 840 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 CD99L2Q8TCZ2 262 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 COPS5Q92905 334 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 MTRQ99707 1265 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 HSD17B14Q9BPX1 270 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 NT5C3AQ9H0P0 336 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 BLOC1S4Q9NUP1 217 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 HOOK1Q9UJC3 728 aaKnown RBP23.73■■□□□ 1.39
CPNE1-204ENST00000397443 DDX41Q9UJV9 622 aaKnown RBP23.73■■□□□ 1.39
CPNE1-204ENST00000397443 CENPFP49454 3210 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 NFASCO94856 1347 aa23.73■■□□□ 1.39
CPNE1-204ENST00000397443 WDR64B1ANS9 1081 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 BIN1O00499 593 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 TGFB3P10600 412 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 PSMC6P62333 389 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 GJC2Q5T442 439 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-204ENST00000397443 CCDC34Q96HJ3 373 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 SENP7Q9BQF6 1050 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 LXNQ9BS40 222 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 VTA1Q9NP79 307 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 HOXC6P09630 235 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 ADCYAP1R1P41586 468 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 FLT3LGP49771 235 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 MDM2Q00987 491 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-204ENST00000397443 PRKCZQ05513 592 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 TTLL4Q14679 1199 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 HYIQ5T013 277 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 ISM2Q6H9L7 571 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 ZNF746Q6NUN9 644 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-204ENST00000397443 TAPT1Q6NXT6 567 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 SCFD2Q8WU76 684 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 LARP4BQ92615 738 aaKnown RBP23.72■■□□□ 1.39
CPNE1-204ENST00000397443 POLR3CQ9BUI4 534 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-204ENST00000397443 CFHR5Q9BXR6 569 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 MLXIPQ9HAP2 919 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 KIAA1468Q9P260 1216 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 WRAP73Q9P2S5 460 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-204ENST00000397443 STK24Q9Y6E0 443 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 SYNGAP1Q96PV0 1343 aa23.72■■□□□ 1.39
CPNE1-204ENST00000397443 GPR25O00155 361 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 JAK3P52333 1124 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 ACTR2P61160 394 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 NEDD9Q14511 834 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 PIGOQ8TEQ8 1089 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 RAD54LQ92698 747 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 KATNBL1Q9H079 304 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 ZBTB39O15060 712 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 FARP2O94887 1054 aaPredicted RBP23.71■■□□□ 1.39
CPNE1-204ENST00000397443 ACVR2BQ13705 512 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 KCNV1Q6PIU1 500 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 RBM43Q6ZSC3 357 aaKnown RBP23.71■■□□□ 1.39
CPNE1-204ENST00000397443 SH3RF1Q7Z6J0 888 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 TUFT1Q9NNX1 390 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 STK17AQ9UEE5 414 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 PCDHA5Q9Y5H7 936 aa23.71■■□□□ 1.39
CPNE1-204ENST00000397443 THSD7BQ9C0I4 1608 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.7■■□□□ 1.38
CPNE1-204ENST00000397443 SFNP31947 248 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 CUL4BQ13620 913 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 UGCGQ16739 394 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 CCDC62Q6P9F0 684 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 SASS6Q6UVJ0 657 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 ABHD16BQ9H3Z7 469 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 CUEDC2Q9H467 287 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 PCDHA10Q9Y5I2 948 aa23.7■■□□□ 1.38
CPNE1-204ENST00000397443 ZNF445P59923 1031 aa23.69■■□□□ 1.38
CPNE1-204ENST00000397443 LRSAM1Q6UWE0 723 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms