RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CNNM2Q9H8M5 875 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 SUGCTQ9HAC7 445 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-208ENST00000397204 LRRC37A2A6NM11 1700 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 TCF20Q9UGU0 1960 aaKnown RBP10.17□□□□□ -0.78
CAPN3-208ENST00000397204 EMSYQ7Z589 1322 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 LINC01553A4QN01 128 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 RSPH10B2B2RC85 870 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 KLRF2D3W0D1 207 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 ZBTB5O15062 677 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 GPR37L1O60883 481 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 LGR5O75473 907 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 RGS20O76081 388 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 RSPH10BP0C881 870 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 MYCLP12524 364 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-208ENST00000397204 MBTPS1Q14703 1052 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 CWC27Q6UX04 472 aaKnown RBP10.17□□□□□ -0.78
CAPN3-208ENST00000397204 SPRED2Q7Z698 418 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 TMCO2Q7Z6W1 182 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-208ENST00000397204 SERINC5Q86VE9 423 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 PLEKHM2Q8IWE5 1019 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 MTMR8Q96EF0 704 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 SPATA33Q96N06 139 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 UBAC1Q9BSL1 405 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 PCDHA1Q9Y5I3 950 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 GBF1Q92538 1859 aa10.17□□□□□ -0.78
CAPN3-208ENST00000397204 SCN5AQ14524 2016 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 OPLAHO14841 1288 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 AMHP03971 560 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 HTRA4P83105 476 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-208ENST00000397204 ZNF200P98182 395 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-208ENST00000397204 TCTN1Q2MV58 587 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 HSDL1Q3SXM5 330 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 PLEKHG4Q58EX7 1191 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 IFIT1BQ5T764 474 aaKnown RBP10.16□□□□□ -0.78
CAPN3-208ENST00000397204 B4GALNT3Q6L9W6 998 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 CHD1LQ86WJ1 897 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 DBF4BQ8NFT6 615 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 SAMD11Q96NU1 681 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 C16orf70Q9BSU1 422 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 UBE2ZQ9H832 354 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-208ENST00000397204 MLXIPQ9HAP2 919 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 MTUS1Q9ULD2 1270 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
CAPN3-208ENST00000397204 TRIP12Q14669 1992 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-208ENST00000397204 C17orf102A2RUQ5 167 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 PALM3A6NDB9 673 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-208ENST00000397204 PI4K2BG5E9Z4 385 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 H3BRB1 525 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 GCOM1H8Y6P7 765 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-208ENST00000397204 GGPS1O95749 300 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 POLR2MP0CAP2 368 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 ZNF286BP0CG31 522 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 CCND2P30279 289 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 THPOP40225 353 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 SP2Q02086 613 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 NUCB1Q02818 461 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 PGM5Q15124 567 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 SEC23AQ15436 765 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 PUS10Q3MIT2 529 aaKnown RBP10.15□□□□□ -0.78
CAPN3-208ENST00000397204 LEXMQ3ZCV2 418 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 FAM117BQ6P1L5 589 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.15□□□□□ -0.78
CAPN3-208ENST00000397204 GDPD5Q8WTR4 605 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 ATP6V0A1Q93050 837 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 WNT8BQ93098 351 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 PHOX2BQ99453 314 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 USP26Q9BXU7 913 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 TUT1Q9H6E5 874 aaKnown RBP10.15□□□□□ -0.78
CAPN3-208ENST00000397204 MAD2L2Q9UI95 211 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 HCN4Q9Y3Q4 1203 aa10.15□□□□□ -0.78
CAPN3-208ENST00000397204 PPP1R11O60927 126 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-208ENST00000397204 CAND2O75155 1236 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 STAM2O75886 525 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 GNAT1P11488 350 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 HOXA13P31271 388 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-208ENST00000397204 HOXC8P31273 242 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 TRDNQ13061 729 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 PTPROQ16827 1216 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 GNPTABQ3T906 1256 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 FAM178BQ8IXR5 827 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 SEPT8Q92599 483 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 TOP1MTQ969P6 601 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 MRPL38Q96DV4 380 aaKnown RBP10.14□□□□□ -0.79
CAPN3-208ENST00000397204 RNPEPQ9H4A4 650 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 RIOX1Q9H6W3 641 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 CD320Q9NPF0 282 aa10.14□□□□□ -0.79
CAPN3-208ENST00000397204 PNMA6FA0A0J9YX94 578 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 SPATA31C2B4DYI2 1134 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 H3BNC9 293 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 UBA1P22314 1058 aaKnown RBP10.13□□□□□ -0.79
CAPN3-208ENST00000397204 KCNA5P22460 613 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 ICAM3P32942 547 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 NEDD9Q14511 834 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 EPC2Q52LR7 807 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 MYOCDQ8IZQ8 938 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 GJD3Q8N144 294 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms