RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 LRMPQ12912 555 aa16.64■□□□□ 0.25
TM9SF1-202ENST00000396854 IRF5Q13568 498 aa16.64■□□□□ 0.25
TM9SF1-202ENST00000396854 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
TM9SF1-202ENST00000396854 ZNF296Q8WUU4 475 aaPredicted RBP16.64■□□□□ 0.25
TM9SF1-202ENST00000396854 KATNBL1Q9H079 304 aa16.64■□□□□ 0.25
TM9SF1-202ENST00000396854 VTA1Q9NP79 307 aa16.64■□□□□ 0.25
TM9SF1-202ENST00000396854 DHX15O43143 795 aaKnown RBP16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 SNAI1O95863 264 aaPredicted RBP16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 TGFB3P10600 412 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 KCNA2P16389 499 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 NDUFA8P51970 172 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 B3GNT9Q6UX72 402 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 SEPT14Q6ZU15 432 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 ZNF710Q8N1W2 664 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 TBC1D22BQ9NU19 505 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 GABRQQ9UN88 632 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 HPSEQ9Y251 543 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 NFASCO94856 1347 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 A0A1B0GVL5 298 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 GAS7O60861 476 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 ATP9AO75110 1047 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 PFKFB1P16118 471 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 FLT3LGP49771 235 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 PRKCZQ05513 592 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 OTOP1Q7RTM1 612 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 DHX40Q8IX18 779 aaKnown RBP16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 SENP7Q9BQF6 1050 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 TEKT3Q9BXF9 490 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 FLRT1Q9NZU1 646 aa16.63■□□□□ 0.25
TM9SF1-202ENST00000396854 RBM47A0AV96 593 aaKnown RBP16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 POTEMA6NI47 508 aa16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 HOXD10P28358 340 aa16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 SPECC1Q5M775 1068 aa16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 ABHD16BQ9H3Z7 469 aa16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 SRRDQ9UH36 339 aa16.62■□□□□ 0.25
TM9SF1-202ENST00000396854 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 ARHGEF6Q15052 776 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 CCL14Q16627 93 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 CCDC144BQ3MJ40 725 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 TAPT1Q6NXT6 567 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 USP49Q70CQ1 688 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 CEP57L1Q8IYX8 460 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 CCSER1Q9C0I3 900 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 LRWD1Q9UFC0 647 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 SP2Q02086 613 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 CCDC62Q6P9F0 684 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 TRMT44Q8IYL2 757 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 SCFD2Q8WU76 684 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 EPSTI1Q96J88 318 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 TIGD1Q96MW7 591 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 NAT10Q9H0A0 1025 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-202ENST00000396854 PP2D1A8MPX8 630 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 BECN2A8MW95 431 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 UBA1P22314 1058 aaKnown RBP16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 GIMAP8Q8ND71 665 aaPredicted RBP16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 SDF4Q9BRK5 362 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 UNC45AQ9H3U1 944 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 LOXHD1Q8IVV2 1947 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 CTIFO43310 598 aaKnown RBP16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 ARIH2O95376 493 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 TXLNAP40222 546 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 KRT76Q01546 638 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 ACVR2BQ13705 512 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 NEDD9Q14511 834 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 TSC1Q92574 1164 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 MMTAG2Q9BU76 263 aaKnown RBP16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 TSKSQ9UJT2 592 aa16.6■□□□□ 0.25
TM9SF1-202ENST00000396854 SLC26A4O43511 780 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 ZNF202O95125 648 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 CDC25AP30304 524 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 UBA7P41226 1012 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 PRMT2P55345 433 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 ZNF746Q6NUN9 644 aaPredicted RBP16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 TRIB2Q92519 343 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 BPIFA3Q9BQP9 254 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 JPH1Q9HDC5 661 aaPredicted RBP16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 PDGFCQ9NRA1 345 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 KCNH3Q9ULD8 1083 aa16.59■□□□□ 0.25
TM9SF1-202ENST00000396854 DDX39AO00148 427 aaKnown RBP16.58■□□□□ 0.25
TM9SF1-202ENST00000396854 CYP2C19P33261 490 aa16.58■□□□□ 0.25
TM9SF1-202ENST00000396854 SYKP43405 635 aa16.58■□□□□ 0.25
TM9SF1-202ENST00000396854 HAUS3Q68CZ6 603 aa16.58■□□□□ 0.25
TM9SF1-202ENST00000396854 NCAPH2Q6IBW4 605 aa16.58■□□□□ 0.25
TM9SF1-202ENST00000396854 CABP7Q86V35 215 aa16.58■□□□□ 0.25
TM9SF1-202ENST00000396854 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.25
TM9SF1-202ENST00000396854 EML1O00423 815 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms