RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 NELFCDQ8IXH7 590 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
ITGB1-202ENST00000396033 TTC26A0AVF1 554 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 FECHP22830 423 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 SYCP1Q15431 976 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 DYDC2Q96IM9 177 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 REEP2Q9BRK0 252 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 TUFT1Q9NNX1 390 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 ZNF112Q9UJU3 913 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 ZBED4O75132 1171 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 EYA4O95677 639 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 BACE1P56817 501 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 GIT2Q14161 759 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 FOXR2Q6PJQ5 311 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 TMTC1Q8IUR5 882 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 TPH2Q8IWU9 490 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 MXRA8Q9BRK3 442 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 WDR11Q9BZH6 1224 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 DNAI1Q9UI46 699 aa13.46□□□□□ -0.25
ITGB1-202ENST00000396033 LUC7L2Q9Y383 392 aaKnown RBP13.46□□□□□ -0.25
ITGB1-202ENST00000396033 NKRFO15226 690 aaKnown RBP eCLIP13.46□□□□□ -0.26
ITGB1-202ENST00000396033 PTPRAP18433 802 aa13.46□□□□□ -0.26
ITGB1-202ENST00000396033 TRIM21P19474 475 aaKnown RBP13.46□□□□□ -0.26
ITGB1-202ENST00000396033 ZCWPW2Q504Y3 356 aa13.46□□□□□ -0.26
ITGB1-202ENST00000396033 MUM1L1Q5H9M0 696 aa13.46□□□□□ -0.26
ITGB1-202ENST00000396033 CYP26C1Q6V0L0 522 aa13.46□□□□□ -0.26
ITGB1-202ENST00000396033 KRT26Q7Z3Y9 468 aa13.46□□□□□ -0.26
ITGB1-202ENST00000396033 GPC2Q8N158 579 aa13.46□□□□□ -0.26
ITGB1-202ENST00000396033 RPTORQ8N122 1335 aa13.46□□□□□ -0.26
ITGB1-202ENST00000396033 LMNB1P20700 586 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 ERVK-24P63145 666 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 MAN2A1Q16706 1144 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 TRIM65Q6PJ69 517 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 SCFD1Q8WVM8 642 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 HSD17B14Q9BPX1 270 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 RUSC1Q9BVN2 902 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 UNC45AQ9H3U1 944 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
ITGB1-202ENST00000396033 TRAF5O00463 557 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 KLK7P49862 253 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 VWA3BQ502W6 1294 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 SFR1Q86XK3 245 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 KCTD17Q8N5Z5 321 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 IL31RAQ8NI17 732 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 PIGOQ8TEQ8 1089 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 CAPN11Q9UMQ6 739 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 ADGRG1Q9Y653 693 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 PHLPP2Q6ZVD8 1323 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 TBCAO75347 108 aaKnown RBP13.45□□□□□ -0.26
ITGB1-202ENST00000396033 FKBP3Q00688 224 aaKnown RBP13.45□□□□□ -0.26
ITGB1-202ENST00000396033 ATG4CQ96DT6 458 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 MRPL44Q9H9J2 332 aaKnown RBP13.45□□□□□ -0.26
ITGB1-202ENST00000396033 PKD2L1Q9P0L9 805 aa13.45□□□□□ -0.26
ITGB1-202ENST00000396033 SLITRK3O94933 977 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 ITGB5P18084 799 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 EPS15P42566 896 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
ITGB1-202ENST00000396033 OR8K1Q8NGG5 319 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 SYTL5Q8TDW5 730 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-202ENST00000396033 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
ITGB1-202ENST00000396033 NDST4Q9H3R1 872 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 ZHX2Q9Y6X8 837 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 RBBP6Q7Z6E9 1792 aaKnown RBP13.44□□□□□ -0.26
ITGB1-202ENST00000396033 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
ITGB1-202ENST00000396033 ERCC3P19447 782 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 HMGCS2P54868 508 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 GHRHRQ02643 423 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 PDCL2Q8N4E4 241 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 VWA5AO00534 786 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 RETREG2Q8NC44 543 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 TRERF1Q96PN7 1200 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 DNAJC7Q99615 494 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 PPP2R3BQ9Y5P8 575 aa13.44□□□□□ -0.26
ITGB1-202ENST00000396033 RSPH10B2B2RC85 870 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 RSPH10BP0C881 870 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 RPS6P62753 249 aaKnown RBP13.43□□□□□ -0.26
ITGB1-202ENST00000396033 WNK4Q96J92 1243 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 TTYH3Q9C0H2 523 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 KCTD10Q9H3F6 313 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 FDX1P10109 184 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 EIF2AK2P19525 551 aaKnown RBP13.43□□□□□ -0.26
ITGB1-202ENST00000396033 CASP5P51878 434 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
ITGB1-202ENST00000396033 GNG11P61952 73 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 EPHA7Q15375 998 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 ACRBPQ8NEB7 543 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 RIT2Q99578 217 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 KCNH7Q9NS40 1196 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 BCRP11274 1271 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 PCNX4Q63HM2 1172 aa13.43□□□□□ -0.26
ITGB1-202ENST00000396033 RINT1Q6NUQ1 792 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms