RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 NSUN3Q9H649 340 aaKnown RBP24.37■■□□□ 1.49
TRAF4-203ENST00000394925 TAF6LQ9Y6J9 622 aa24.37■■□□□ 1.49
TRAF4-203ENST00000394925 COL4A6Q14031 1691 aa24.37■■□□□ 1.49
TRAF4-203ENST00000394925 PIEZO1Q92508 2521 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 PRR33A8MZF0 331 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 E7EWF7 191 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 ALADP13716 330 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 USP17L6PQ6QN14 398 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 FIBCD1Q8N539 461 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 NCOA7Q8NI08 942 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 UIMC1Q96RL1 719 aa24.36■■□□□ 1.49
TRAF4-203ENST00000394925 CHRNA1P02708 482 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 GHRP10912 638 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 GSPT1P15170 499 aaKnown RBP24.35■■□□□ 1.49
TRAF4-203ENST00000394925 CTNNB1P35222 781 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 PCNX4Q63HM2 1172 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 CUL5Q93034 780 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 SENP7Q9BQF6 1050 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 CLDND1Q9NY35 253 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 NRCAMQ92823 1304 aa24.35■■□□□ 1.49
TRAF4-203ENST00000394925 RUFY4Q6ZNE9 571 aa24.34■■□□□ 1.49
TRAF4-203ENST00000394925 NLRX1Q86UT6 975 aa24.34■■□□□ 1.49
TRAF4-203ENST00000394925 RUFY2Q8WXA3 655 aa24.34■■□□□ 1.49
TRAF4-203ENST00000394925 FAM50BQ9Y247 325 aa24.34■■□□□ 1.49
TRAF4-203ENST00000394925 TCF7P36402 384 aaPredicted RBP24.33■■□□□ 1.49
TRAF4-203ENST00000394925 COL19A1Q14993 1142 aa24.33■■□□□ 1.49
TRAF4-203ENST00000394925 TTC22Q5TAA0 569 aa24.33■■□□□ 1.49
TRAF4-203ENST00000394925 XRRA1Q6P2D8 792 aa24.33■■□□□ 1.49
TRAF4-203ENST00000394925 RRP36Q96EU6 259 aaKnown RBP24.33■■□□□ 1.49
TRAF4-203ENST00000394925 C5orf42Q9H799 3197 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 ATG2AQ2TAZ0 1938 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 MEIS2O14770 477 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 PDE4AP27815 886 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 ANTXR2P58335 489 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 CSPP1Q1MSJ5 1256 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 RPAINQ86UA6 219 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 GIMAP8Q8ND71 665 aaPredicted RBP24.32■■□□□ 1.48
TRAF4-203ENST00000394925 IGDCC4Q8TDY8 1250 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 MYL10Q9BUA6 226 aa24.32■■□□□ 1.48
TRAF4-203ENST00000394925 C5orf67F2Z3F1 127 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 GRM6O15303 877 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 DCXO43602 365 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 ATP9AO75110 1047 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 RB1P06400 928 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 CHMLP26374 656 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 BMPR1AP36894 532 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 ZP2Q05996 745 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 PPFIA1Q13136 1202 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 LPIN1Q14693 890 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 TAF2Q6P1X5 1199 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 CTCFLQ8NI51 663 aaPredicted RBP24.31■■□□□ 1.48
TRAF4-203ENST00000394925 SPZ1Q9BXG8 430 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 EHMT1Q9H9B1 1298 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 ADGRA3Q8IWK6 1321 aa24.31■■□□□ 1.48
TRAF4-203ENST00000394925 PIK3CDO00329 1044 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 ENPP3O14638 875 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 LINC00271P0C7V0 271 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 MARK3P27448 753 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 LTBRP36941 435 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 MGAT3Q09327 533 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 RSPH3Q86UC2 560 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 C11orf84Q9BUA3 381 aaPredicted RBP24.3■■□□□ 1.48
TRAF4-203ENST00000394925 PRKAG3Q9UGI9 489 aa24.3■■□□□ 1.48
TRAF4-203ENST00000394925 SEC63Q9UGP8 760 aaKnown RBP24.3■■□□□ 1.48
TRAF4-203ENST00000394925 TTC3P53804 2025 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 GSTTP1A0A1W2PQM5 241 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 NCK2O43639 380 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 CSPG5O95196 566 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 KCNA2P16389 499 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 KIF5BP33176 963 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 CLUL1Q15846 466 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 GRIK4Q16099 956 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 MB21D2Q8IYB1 491 aaPredicted RBP24.29■■□□□ 1.48
TRAF4-203ENST00000394925 ZNF654Q8IZM8 581 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 DNAJB3Q8WWF6 145 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 SEPT1Q8WYJ6 367 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 MAP3K14Q99558 947 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 LMAN2LQ9H0V9 348 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 TUBE1Q9UJT0 475 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 RWDD3Q9Y3V2 267 aa24.29■■□□□ 1.48
TRAF4-203ENST00000394925 POTEB3A0JP26 581 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 HYAL1Q12794 435 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 BTG3Q14201 252 aaPredicted RBP24.28■■□□□ 1.48
TRAF4-203ENST00000394925 POTEBQ6S5H4 581 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 ADHFE1Q8IWW8 467 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 GLG1Q92896 1179 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 GPRASP2Q96D09 838 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 RC3H2Q9HBD1 1191 aaKnown RBP24.28■■□□□ 1.48
TRAF4-203ENST00000394925 LY9Q9HBG7 655 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 ERAP1Q9NZ08 941 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 PKD2L1Q9P0L9 805 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 CDY2AQ9Y6F7 541 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 TRIOO75962 3097 aa24.28■■□□□ 1.48
TRAF4-203ENST00000394925 C19orf67A6NJJ6 358 aa24.27■■□□□ 1.48
TRAF4-203ENST00000394925 DDAH1O94760 285 aa24.27■■□□□ 1.48
TRAF4-203ENST00000394925 ITGB5P18084 799 aa24.27■■□□□ 1.48
TRAF4-203ENST00000394925 DLX2Q07687 328 aaPredicted RBP24.27■■□□□ 1.48
TRAF4-203ENST00000394925 CTC1Q2NKJ3 1217 aa24.27■■□□□ 1.48
TRAF4-203ENST00000394925 FBXO47Q5MNV8 452 aa24.27■■□□□ 1.48
TRAF4-203ENST00000394925 ALYREFQ86V81 257 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms