RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GSDMDP57764 484 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 CALCRLQ16602 461 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 CYP2W1Q8TAV3 490 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 FAM71BQ8TC56 605 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 HOMER2Q9NSB8 354 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 DDX25Q9UHL0 483 aaKnown RBP21■□□□□ 0.95
CCDC50-202ENST00000392456 LAD1O00515 517 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 NFIBO00712 420 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 AFMP43652 599 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 ARHGAP4P98171 946 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 DPCR1Q3MIW9 517 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 ELP3Q9H9T3 547 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 ZC3H4Q9UPT8 1303 aaKnown RBP20.99■□□□□ 0.95
CCDC50-202ENST00000392456 A0A1B0GUA9 196 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 GOLGA6L19H0YKK7 550 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 UBXN2AP68543 259 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 HDXQ7Z353 690 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 HNRNPLLQ8WVV9 542 aaKnown RBP20.99■□□□□ 0.95
CCDC50-202ENST00000392456 MTRQ99707 1265 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 SPDYE3A6NKU9 549 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 PIK3CDO00329 1044 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 TRAF5O00463 557 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 FANCGO15287 622 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 AP3B2Q13367 1082 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 MCM6Q14566 821 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 PDCD2Q16342 344 aaPredicted RBP20.99■□□□□ 0.95
CCDC50-202ENST00000392456 MAP1SQ66K74 1059 aaPredicted RBP20.99■□□□□ 0.95
CCDC50-202ENST00000392456 DRAXINQ8NBI3 349 aaPredicted RBP20.99■□□□□ 0.95
CCDC50-202ENST00000392456 PARD3BQ8TEW8 1205 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 TUBE1Q9UJT0 475 aa20.99■□□□□ 0.95
CCDC50-202ENST00000392456 FAM86B1E9PN63 330 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 VWA5AO00534 786 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 FAM86B2P0C5J1 330 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 POSTNQ15063 836 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 TRIM65Q6PJ69 517 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 CLEC4DQ8WXI8 215 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 C12orf42Q96LP6 360 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 C19orf81C9J6K1 198 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 ALAS1P13196 640 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 BMP6P22004 513 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 GCKP35557 465 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 FNTAP49354 379 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 STX1AQ16623 288 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 BEND6Q5SZJ8 279 aaPredicted RBP20.98■□□□□ 0.95
CCDC50-202ENST00000392456 PAGE5Q96GU1 130 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 MMTAG2Q9BU76 263 aaKnown RBP20.98■□□□□ 0.95
CCDC50-202ENST00000392456 KIF9Q9HAQ2 790 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 CLEC11AQ9Y240 323 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 MRPL11Q9Y3B7 192 aaKnown RBP20.98■□□□□ 0.95
CCDC50-202ENST00000392456 RIPK3Q9Y572 518 aa20.98■□□□□ 0.95
CCDC50-202ENST00000392456 IQCA1LA6NCM1 817 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 POTEMA6NI47 508 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 PEX10O60683 326 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 PECAM1P16284 738 aaPredicted RBP20.97■□□□□ 0.95
CCDC50-202ENST00000392456 TTLL12Q14166 644 aaPredicted RBP20.97■□□□□ 0.95
CCDC50-202ENST00000392456 NAALADL2Q58DX5 795 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 TREML2Q5T2D2 321 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 ACBD3Q9H3P7 528 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 COL20A1Q9P218 1284 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 CSADQ9Y600 493 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 GCOM1H8Y6P7 765 aaPredicted RBP20.97■□□□□ 0.95
CCDC50-202ENST00000392456 POLR2MP0CAP2 368 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 SREBF1P36956 1147 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 USP11P51784 963 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 IGSF22Q8N9C0 903 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 OTUD5Q96G74 571 aa20.97■□□□□ 0.95
CCDC50-202ENST00000392456 OTOFQ9HC10 1997 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 CLNS1AP54105 237 aaKnown RBP20.96■□□□□ 0.95
CCDC50-202ENST00000392456 PDXDC2PQ6P474 469 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 POTEEQ6S8J3 1075 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 SH3RF1Q7Z6J0 888 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 LENG9Q96B70 501 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 NUDT12Q9BQG2 462 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 RLFQ13129 1914 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 PPFIA2O75334 1257 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 UBA7P41226 1012 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 IREB2P48200 963 aaKnown RBP20.96■□□□□ 0.95
CCDC50-202ENST00000392456 PRR16Q569H4 304 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 CATSPERGQ6ZRH7 1159 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 FAM204AQ9H8W3 233 aa20.96■□□□□ 0.95
CCDC50-202ENST00000392456 ABCB11O95342 1321 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 CYP3A7-CYP3A51PA0A087WV96 503 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 FOSP01100 380 aaPredicted RBP20.95■□□□□ 0.94
CCDC50-202ENST00000392456 CYP3A7P24462 503 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 ORC2Q13416 577 aaPredicted RBP20.95■□□□□ 0.94
CCDC50-202ENST00000392456 SLC30A10Q6XR72 485 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 REPS2Q8NFH8 660 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 DISC1Q9NRI5 854 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 ANO10Q9NW15 660 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 TXLNAP40222 546 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 MBOAT7Q96N66 472 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 BLZF1Q9H2G9 400 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 SUDS3Q9H7L9 328 aaPredicted RBP20.95■□□□□ 0.94
CCDC50-202ENST00000392456 TMOD4Q9NZQ9 345 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 CAPN7Q9Y6W3 813 aa20.95■□□□□ 0.94
CCDC50-202ENST00000392456 PAPPA2Q9BXP8 1791 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 EBAG9O00559 213 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 DSG3P32926 999 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 SNX1Q13596 522 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 DHX8Q14562 1220 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms