RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ASCC2Q9H1I8 757 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 C12orf65Q9H3J6 166 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NELFAQ9H3P2 528 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SERHL2Q9H4I8 314 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF576Q9H609 170 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 WFDC1Q9HC57 220 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 MLXIPLQ9NP71 852 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ALG13Q9NP73 1137 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NGRNQ9NPE2 291 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF275Q9NSD4 429 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ERVK13-1Q9NX77 482 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TUBA8Q9NY65 449 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PLA2G3Q9NZ20 509 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM63CQ9P1W3 806 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CNTN3Q9P232 1028 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC17A6Q9P2U8 582 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TRPS1Q9UHF7 1281 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CROTQ9UKG9 612 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TP53TG3Q9ULZ0 132 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NR2E1Q9Y466 385 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RBM19Q9Y4C8 960 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CSADQ9Y600 493 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 EPN1Q9Y6I3 576 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SNED1Q8TER0 1413 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 DHX57Q6P158 1386 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 COL4A4P53420 1690 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 COL4A3Q01955 1670 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 A0A0B4J293 547 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CENPVL1A0A0U1RR11 272 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 SHISA3A0PJX4 238 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PRAMEF27A3QJZ7 478 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CD8B2A6NJW9 211 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 LINC01548A6NM66 108 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 DCDC2CA8MYV0 355 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GOLGA6L6A8MZA4 724 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 APBB1O00213 710 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ACOT8O14734 319 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 TNFRSF10CO14798 259 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 TRIM24O15164 1050 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ARHGAP6O43182 974 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FOXO3O43524 673 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 LDB3O75112 727 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PHACTR2O75167 634 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PRB2P02812 416 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CHGBP05060 677 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FGF3P11487 239 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CD19P15391 556 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GPD1P21695 349 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 IGFBP4P22692 258 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MYF6P23409 242 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 TACR1P25103 407 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CERS1P27544 350 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 EPHB2P29323 1055 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PLA2G5P39877 138 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CDKN2AP42771 156 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC6A11P48066 632 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ATP1A2P50993 1020 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 NPEPPSP55786 919 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 KRTAP10-10P60014 251 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 LMO4P61968 165 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ETF1P62495 437 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 NKX3-2P78367 333 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 DLK1P80370 383 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ZXDBP98169 803 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PTPN12Q05209 780 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PPP2R3AQ06190 1150 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MAP3K12Q12852 859 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FOXI1Q12951 378 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GRM1Q13255 1194 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 NMIQ13287 307 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 NFYCQ13952 458 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 RBM39Q14498 530 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 DSC3Q14574 896 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 KRT72Q14CN4 511 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 RABEP1Q15276 862 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 LRRC41Q15345 812 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 TWIST1Q15672 202 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 DDB1Q16531 1140 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF239Q16600 458 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 NKG7Q16617 165 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 RNF151Q2KHN1 245 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ZMAT1Q5H9K5 638 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 AKNAD1Q5T1N1 836 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PIK3R6Q5UE93 754 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ABHD17BQ5VST6 288 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 SPTY2D1Q68D10 685 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CCDC102BQ68D86 513 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ABLIM2Q6H8Q1 611 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CYP2R1Q6VVX0 501 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ZPBP2Q6X784 338 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 DNAJC14Q6Y2X3 702 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GPR155Q7Z3F1 870 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MRPL10Q7Z7H8 261 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PDZD3Q86UT5 571 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 STK32CQ86UX6 486 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 P2RY8Q86VZ1 359 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MIB1Q86YT6 1006 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CCNJLQ8IV13 435 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 HID1Q8IV36 788 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 SULF2Q8IWU5 870 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms