RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 PAPD7Q5XG87 772 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 NFRKBQ6P4R8 1299 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 RETREG2Q8NC44 543 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 P2RX7Q99572 595 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 COA1Q9GZY4 146 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 MYH7BA7E2Y1 1941 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 PVALEFA0A1B0GWK0 134 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 EEF2P13639 858 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 CLNS1AP54105 237 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 CORO7P57737 925 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 RASSF7Q02833 373 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 KCNMA1Q12791 1236 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 KCTD19Q17RG1 926 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 FAM26FQ5R3K3 315 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 DNAAF5Q86Y56 855 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 EFCAB13Q8IY85 973 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 CCDC170Q8IYT3 715 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 CRAMP1Q96RY5 1269 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 ACBD3Q9H3P7 528 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 PLAGL2Q9UPG8 496 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 SLC1A4P43007 532 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 CLK2P49760 499 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 MRPL12P52815 198 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 NBPF9Q3BBW0 867 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 HERC4Q5GLZ8 1057 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 GPBP1Q86WP2 473 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 SP8Q8IXZ3 490 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 HDAC7Q8WUI4 952 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 THOC1Q96FV9 657 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 ATP6V0A2Q9Y487 856 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 KRT18P05783 430 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 HLA-DOAP06340 250 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 SEPT2Q15019 361 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 TRIM6Q9C030 488 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 LY75O60449 1722 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 MED24O75448 989 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 PLA2G4BP0C869 781 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 PSMC6P62333 389 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 SLC7A5Q01650 507 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 PDIA5Q14554 519 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 PRR16Q569H4 304 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 BAP1Q92560 729 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 TEKT1Q969V4 418 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 TSG101Q99816 390 aa12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 LSM14BQ9BX40 385 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-201ENST00000389212 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 A0A087WUV0 522 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 AP1G2O75843 785 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 MAGEA1P43355 309 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 CRKP46108 304 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 POLR2FP61218 127 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 CDC37Q16543 378 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 PTPROQ16827 1216 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 SWT1Q5T5J6 900 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 SUGP1Q8IWZ8 645 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 CASP5P51878 434 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 EHHADHQ08426 723 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 SLFN13Q68D06 897 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 FMNL3Q8IVF7 1028 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 PROM2Q8N271 834 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 ANO3Q9BYT9 981 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
RAPGEF3-201ENST00000389212 A0A1W2PQJ5 194 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 hCG_1984214I3L0E3 225 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 USO1O60763 962 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 ELF1P32519 619 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 LRRC63Q05C16 580 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 ZNF713Q8N859 430 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 EHBP1Q8NDI1 1231 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 ODF2LQ9ULJ1 636 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 COL4A3BPQ9Y5P4 624 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 PPP1R2P41236 205 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 RNASE9P60153 205 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 PDXDC1Q6P996 788 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 CYP2W1Q8TAV3 490 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 MIEF2Q96C03 454 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 MS4A14Q96JA4 679 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 TACC1O75410 805 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 RPSAP08865 295 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 ACTN1P12814 892 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 NEDD9Q14511 834 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 FIGNQ5HY92 759 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms