RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 YIPF3Q9GZM5 350 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 KMT5AQ9NQR1 393 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ADA2Q9NZK5 511 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 PPIP5K1Q6PFW1 1433 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 CCDC195A0A1B0GUA6 201 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 NEMP1O14524 444 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 RNMTO43148 476 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 CA4P22748 312 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 HDAC4P56524 1084 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 PARP10Q53GL7 1025 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 FAM26FQ5R3K3 315 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ADALQ6DHV7 355 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 KRT26Q7Z3Y9 468 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 NDUFAF2Q8N183 169 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ULK4Q96C45 1275 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 FAF2Q96CS3 445 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 CASS4Q9NQ75 786 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ATP11BQ9Y2G3 1177 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 DAB1O75553 588 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 APOA1P02647 267 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ZNF445P59923 1031 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 DEPDC1Q5TB30 811 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 HEXIM2Q96MH2 286 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 KRT87PA6NCN2 255 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
RFX3-204ENST00000382004 NNTQ13423 1086 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 PTPN21Q16825 1174 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 CCDC92Q53HC0 331 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 C1orf146Q5VVC0 180 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ACAD11Q709F0 780 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ZSCAN10Q96SZ4 725 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 UBE2TQ9NPD8 197 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 AFF4Q9UHB7 1163 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 UBN2Q6ZU65 1347 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 PCDH11XQ9BZA7 1347 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 PCDH11YQ9BZA8 1340 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 USP17L12C9JPN9 530 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 USP17L21D6R901 530 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 TCF3P15923 654 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 PSMC2P35998 433 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 RBBP7Q16576 425 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 NOSTRINQ8IVI9 506 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 RETREG2Q8NC44 543 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 SYMPKQ92797 1274 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 DCAF5Q96JK2 942 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ELAC2Q9BQ52 826 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 OSBPL10Q9BXB5 764 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 GEMIN8Q9NWZ8 242 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 SATB2Q9UPW6 733 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 RASGRF2O14827 1237 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 PRPF4O43172 522 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFX3-204ENST00000382004 GTPBP6O43824 516 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 BRD2P25440 801 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 CASP14P31944 242 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 IDI1Q13907 227 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 SPATA1Q5VX52 437 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 KBTBD3Q8NAB2 608 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ZC3H15Q8WU90 426 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 MTBPQ96DY7 904 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 PPP1R13BQ96KQ4 1090 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 TUBGCP2Q9BSJ2 902 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 METTL22Q9BUU2 404 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 CNOT10Q9H9A5 744 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 RALGAPBQ86X10 1494 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 F5H423 210 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 M0R2C6 588 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 PGRMC1O00264 195 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 WDR47O94967 919 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 MDM2Q00987 491 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 DMC1Q14565 340 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 EFTUD2Q15029 972 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFX3-204ENST00000382004 MFSD14BQ5SR56 506 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 SDR42E1Q8WUS8 393 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 AP1M1Q9BXS5 423 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ARPP21Q9UBL0 812 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 MYL1P05976 194 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 NR2F2P24468 414 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 MORF4L2Q15014 288 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 AARS2Q5JTZ9 985 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 NUGGCQ68CJ6 796 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 DCPSQ96C86 337 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ZMYND12Q9H0C1 365 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 CCDC87Q9NVE4 849 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 DISP3Q9P2K9 1392 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 KLRF2D3W0D1 207 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 SRGAP2CP0DJJ0 459 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 PAPOLAP51003 745 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 USP28Q96RU2 1077 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 TRIM8Q9BZR9 551 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 RUBCNLQ9H714 662 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ACTR5Q9H9F9 607 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 MRPL47Q9HD33 250 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 HPS4Q9NQG7 708 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 SMARCA4P51532 1647 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ARIH2O95376 493 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 RECQLP46063 649 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms