RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CCDC150Q8NCX0 1101 aa13.88□□□□□ -0.19
CIITA-202ENST00000381835 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
CIITA-202ENST00000381835 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
CIITA-202ENST00000381835 CCDC102AQ96A19 550 aa13.88□□□□□ -0.19
CIITA-202ENST00000381835 PAGE5Q96GU1 130 aa13.88□□□□□ -0.19
CIITA-202ENST00000381835 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
CIITA-202ENST00000381835 ASTN1O14525 1302 aa13.88□□□□□ -0.19
CIITA-202ENST00000381835 CHMP2AO43633 222 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 BCRP11274 1271 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 FCER1AP12319 257 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 CASP1P29466 404 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 NIPA1Q7RTP0 329 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 LRRC15Q8TF66 581 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 VAV3Q9UKW4 847 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 PCDHA5Q9Y5H7 936 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 SOWAHBA6NEL2 793 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 DDX39AO00148 427 aaKnown RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 NRDCO43847 1150 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 PSMD10O75832 226 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 SFPQP23246 707 aaKnown RBP eCLIP13.87□□□□□ -0.19
CIITA-202ENST00000381835 CCT6AP40227 531 aaKnown RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 FSTL1Q12841 308 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 GRB10Q13322 594 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 TAF1CQ15572 869 aaPredicted RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 E4F1Q66K89 784 aaPredicted RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 FBXO38Q6PIJ6 1188 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 OTOP1Q7RTM1 612 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 ELOA2Q8IYF1 753 aaPredicted RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 SHCBP1Q8NEM2 672 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
CIITA-202ENST00000381835 CPA4Q9UI42 421 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 MCM3APO60318 1980 aa13.87□□□□□ -0.19
CIITA-202ENST00000381835 EML1O00423 815 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 ECM1Q16610 540 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 CYP4F22Q6NT55 531 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 FAM133AQ8N9E0 248 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 PPP1R13BQ96KQ4 1090 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 PNMA5Q96PV4 448 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 IWS1Q96ST2 819 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 ZIC5Q96T25 663 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 MTRQ99707 1265 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 AGO4Q9HCK5 861 aaKnown RBP13.86□□□□□ -0.19
CIITA-202ENST00000381835 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
CIITA-202ENST00000381835 NLRP12P59046 1061 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 DHX8Q14562 1220 aaKnown RBP13.86□□□□□ -0.19
CIITA-202ENST00000381835 STXBP2Q15833 593 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 ARMCX5Q6P1M9 558 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 TEKT3Q9BXF9 490 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 PLXNB2O15031 1838 aa13.86□□□□□ -0.19
CIITA-202ENST00000381835 DOCK5Q9H7D0 1870 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 ATP9AO75110 1047 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 INHBEP58166 350 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
CIITA-202ENST00000381835 PPP2R5CQ13362 524 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 FAM110CQ1W6H9 321 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 HAUS3Q68CZ6 603 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 SYT10Q6XYQ8 523 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 NLRX1Q86UT6 975 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 SMARCE1Q969G3 411 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 INPP4AQ96PE3 977 aaPredicted RBP13.85□□□□□ -0.19
CIITA-202ENST00000381835 RIT2Q99578 217 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 UNC45AQ9H3U1 944 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 TUBE1Q9UJT0 475 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 KIAA1024Q9UPX6 916 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 MED24O75448 989 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 RGS20O76081 388 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 SREBF2Q12772 1141 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
CIITA-202ENST00000381835 CATSPER3Q86XQ3 398 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 HHIPL1Q96JK4 782 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 CUEDC2Q9H467 287 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 IVNS1ABPQ9Y6Y0 642 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
CIITA-202ENST00000381835 DNAJC25-GNG10A0A024R161 153 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 DHX15O43143 795 aaKnown RBP13.84□□□□□ -0.19
CIITA-202ENST00000381835 PDE4DQ08499 809 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 CUL4BQ13620 913 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 GNPTABQ3T906 1256 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 TMEM119Q4V9L6 283 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 EEPD1Q7L9B9 569 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 KCNK18Q7Z418 384 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 GPRASP2Q96D09 838 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 EIF2AK1Q9BQI3 630 aaKnown RBP13.84□□□□□ -0.19
CIITA-202ENST00000381835 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 ZCCHC17Q9NP64 241 aaKnown RBP13.84□□□□□ -0.19
CIITA-202ENST00000381835 BLOC1S4Q9NUP1 217 aa13.84□□□□□ -0.19
CIITA-202ENST00000381835 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms