RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 MSH4O15457 936 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 HSP90AA1P07900 732 aaKnown RBP18.32■□□□□ 0.52
SNRPB-201ENST00000381342 GCFC2P16383 781 aaKnown RBP18.32■□□□□ 0.52
SNRPB-201ENST00000381342 PSMC6P62333 389 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 FPGSQ05932 587 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 DGKDQ16760 1214 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 Q4G0T1 1027 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 GJA10Q969M2 543 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 GPR20Q99678 358 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 SDF4Q9BRK5 362 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 MTG1Q9BT17 334 aaPredicted RBP18.32■□□□□ 0.52
SNRPB-201ENST00000381342 JPH1Q9HDC5 661 aaPredicted RBP18.32■□□□□ 0.52
SNRPB-201ENST00000381342 PCDH10Q9P2E7 1040 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 MYH15Q9Y2K3 1946 aa18.31■□□□□ 0.52
SNRPB-201ENST00000381342 TIMP1P01033 207 aa18.31■□□□□ 0.52
SNRPB-201ENST00000381342 HOXD8P13378 290 aaPredicted RBP18.31■□□□□ 0.52
SNRPB-201ENST00000381342 ATP2B1P20020 1258 aa18.31■□□□□ 0.52
SNRPB-201ENST00000381342 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.52
SNRPB-201ENST00000381342 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
SNRPB-201ENST00000381342 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
SNRPB-201ENST00000381342 SLC9A2Q9UBY0 812 aa18.31■□□□□ 0.52
SNRPB-201ENST00000381342 DHX15O43143 795 aaKnown RBP18.3■□□□□ 0.52
SNRPB-201ENST00000381342 SUPT20HL2P0C7V6 817 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 PDCP20941 246 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 PPIGQ13427 754 aaKnown RBP eCLIP18.3■□□□□ 0.524e-8■□□□□ 8.6
SNRPB-201ENST00000381342 PPP4R3AQ6IN85 833 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 TRIM50Q86XT4 487 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 FAM126BQ8IXS8 530 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 TMEM199Q8N511 208 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 ETNPPLQ8TBG4 499 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 LRCH3Q96II8 777 aa18.3■□□□□ 0.52
SNRPB-201ENST00000381342 NAP1L4Q99733 375 aaKnown RBP18.3■□□□□ 0.52
SNRPB-201ENST00000381342 CCNE2O96020 404 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 LGALS2P05162 132 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 SYT1P21579 422 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 TCF7P36402 384 aaPredicted RBP18.29■□□□□ 0.52
SNRPB-201ENST00000381342 CHMP4BP1P59074 171 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 ACTR2P61160 394 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 UTP14CQ5TAP6 766 aaKnown RBP18.29■□□□□ 0.52
SNRPB-201ENST00000381342 MFSD5Q6N075 450 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 GPR153Q6NV75 609 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 SLC43A3Q8NBI5 491 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 KAT2BQ92831 832 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 SLC5A5Q92911 643 aa18.29■□□□□ 0.52
SNRPB-201ENST00000381342 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 GSTTP1A0A1W2PQM5 241 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
SNRPB-201ENST00000381342 NEMFO60524 1076 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 GAS7O60861 476 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 F2P00734 622 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 NBR1Q14596 966 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 SHHQ15465 462 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 TTC38Q5R3I4 469 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 LRCH2Q5VUJ6 765 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 PPP1R12CQ9BZL4 782 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 KCNMB3Q9NPA1 279 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 TBC1D22BQ9NU19 505 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 TBX21Q9UL17 535 aa18.28■□□□□ 0.52
SNRPB-201ENST00000381342 NOL7Q9UMY1 257 aaKnown RBP18.28■□□□□ 0.52
SNRPB-201ENST00000381342 PPFIA4O75335 1185 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 MCM7P33993 719 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 PSEN2P49810 448 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 FERMT3Q86UX7 667 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 SEPT1Q8WYJ6 367 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 RIT2Q99578 217 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 C16orf70Q9BSU1 422 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 TEKT3Q9BXF9 490 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 HIPK3Q9H422 1215 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 TCEAL9Q9UHQ7 104 aa18.27■□□□□ 0.52
SNRPB-201ENST00000381342 MYH9P35579 1960 aaKnown RBP18.27■□□□□ 0.52
SNRPB-201ENST00000381342 LTBP2Q14767 1821 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 CHMP2AO43633 222 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 PSMD10O75832 226 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 CD4P01730 458 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 ITGB8P26012 769 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 TOB1P50616 345 aaPredicted RBP18.26■□□□□ 0.51
SNRPB-201ENST00000381342 KRT76Q01546 638 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 BECN1Q14457 450 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 MFSD10Q14728 455 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 NBPF20Q3BBV1 942 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 ZNF746Q6NUN9 644 aaPredicted RBP18.26■□□□□ 0.51
SNRPB-201ENST00000381342 HAS1Q92839 578 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
SNRPB-201ENST00000381342 KATNAL1Q9BW62 490 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 UNC45AQ9H3U1 944 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 MTMR6Q9Y217 621 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 NOD1Q9Y239 953 aa18.26■□□□□ 0.51
SNRPB-201ENST00000381342 EMSYQ7Z589 1322 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 HAS3O00219 553 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 STX6O43752 255 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 TRAPPC10P48553 1259 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 PTPN11Q06124 597 aaPredicted RBP18.25■□□□□ 0.51
SNRPB-201ENST00000381342 ZNF174Q15697 407 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 CALCRLQ16602 461 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 KIAA0753Q2KHM9 967 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 PCYT2Q99447 389 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 TMEM60Q9H2L4 133 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms