RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ABHD15Q6UXT9 468 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 BRAPQ7Z569 592 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 GJA10Q969M2 543 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 MTMR9Q96QG7 549 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 IGKV6D-21A0A0A0MT36 114 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 ARVCFO00192 962 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 NEMFO60524 1076 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 LGR5O75473 907 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 MCM7P33993 719 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 PSMC6P62333 389 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 ZNF174Q15697 407 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 SMAP1Q8IYB5 467 aaPredicted RBP21.18■□□□□ 0.98
SSU72-203ENST00000378725 SLFN12Q8IYM2 578 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 PCYT2Q99447 389 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 KATNAL1Q9BW62 490 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 TEKT3Q9BXF9 490 aa21.18■□□□□ 0.98
SSU72-203ENST00000378725 H3BRB1 525 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 BAG4O95429 457 aaKnown RBP21.17■□□□□ 0.98
SSU72-203ENST00000378725 ZNF286BP0CG31 522 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 RESTQ13127 1097 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 NBPF20Q3BBV1 942 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 NFRKBQ6P4R8 1299 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 ANKRD33Q7Z3H0 272 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 C4orf32Q8N8J7 132 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 UNC45AQ9H3U1 944 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 TUT1Q9H6E5 874 aaKnown RBP21.17■□□□□ 0.98
SSU72-203ENST00000378725 PCDHB6Q9Y5E3 794 aa21.17■□□□□ 0.98
SSU72-203ENST00000378725 EMSYQ7Z589 1322 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 SUPT20HL2P0C7V6 817 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 PSEN2P49810 448 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 PPP2R5CQ13362 524 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 NBR1Q14596 966 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 MFSD10Q14728 455 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 CALCRLQ16602 461 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 UTP14CQ5TAP6 766 aaKnown RBP21.16■□□□□ 0.98
SSU72-203ENST00000378725 MIS18BP1Q6P0N0 1132 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 PLPPR4Q7Z2D5 763 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 FERMT3Q86UX7 667 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 RDM1Q8NG50 284 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 TOX2Q96NM4 488 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 TMEM60Q9H2L4 133 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 SMARCAD1Q9H4L7 1026 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.16■□□□□ 0.98
SSU72-203ENST00000378725 VAV3Q9UKW4 847 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 PCDHA10Q9Y5I2 948 aa21.16■□□□□ 0.98
SSU72-203ENST00000378725 WDR64B1ANS9 1081 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 MARCH6O60337 910 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 SFNP31947 248 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 RTP1P59025 263 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 PTPN11Q06124 597 aaPredicted RBP21.15■□□□□ 0.98
SSU72-203ENST00000378725 KIAA0753Q2KHM9 967 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 TRIM60Q495X7 471 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 SESTD1Q86VW0 696 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 AFAP1L1Q8TED9 768 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 ZSCAN16Q9H4T2 348 aaPredicted RBP21.15■□□□□ 0.98
SSU72-203ENST00000378725 TCEAL9Q9UHQ7 104 aa21.15■□□□□ 0.98
SSU72-203ENST00000378725 DOCK5Q9H7D0 1870 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 MROH7Q68CQ1 1323 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 PSAPP07602 524 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 STAT5BP51692 787 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 JAK3P52333 1124 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 MLLT1Q03111 559 aaPredicted RBP21.14■□□□□ 0.97
SSU72-203ENST00000378725 TRIM50Q86XT4 487 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 AZI2Q9H6S1 392 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 DISC1Q9NRI5 854 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 ERAP1Q9NZ08 941 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 ZNF215Q9UL58 517 aaPredicted RBP21.14■□□□□ 0.97
SSU72-203ENST00000378725 PCDHA12Q9UN75 941 aa21.14■□□□□ 0.97
SSU72-203ENST00000378725 TLE2Q04725 743 aa21.13■□□□□ 0.97
SSU72-203ENST00000378725 SPIRE1Q08AE8 756 aa21.13■□□□□ 0.97
SSU72-203ENST00000378725 SWSAP1Q6NVH7 229 aa21.13■□□□□ 0.97
SSU72-203ENST00000378725 FAM126BQ8IXS8 530 aa21.13■□□□□ 0.97
SSU72-203ENST00000378725 DPF3Q92784 378 aa21.13■□□□□ 0.97
SSU72-203ENST00000378725 GLG1Q92896 1179 aa21.13■□□□□ 0.97
SSU72-203ENST00000378725 RNPEPQ9H4A4 650 aa21.13■□□□□ 0.97
SSU72-203ENST00000378725 TTC12Q9H892 705 aaPredicted RBP21.13■□□□□ 0.97
SSU72-203ENST00000378725 MAFBQ9Y5Q3 323 aaPredicted RBP21.13■□□□□ 0.97
SSU72-203ENST00000378725 EML1O00423 815 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 LAD1O00515 517 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 CD4P01730 458 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 OR52Z1P0C646 297 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 TXKP42681 527 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 SLC26A2P50443 739 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 PTGDRQ13258 359 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 FAM160B1Q5W0V3 765 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 MIER3Q7Z3K6 550 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 CCDC60Q8IWA6 550 aaPredicted RBP21.12■□□□□ 0.97
SSU72-203ENST00000378725 ZNF302Q9NR11 478 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 HDAC6Q9UBN7 1215 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 ATP11BQ9Y2G3 1177 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 SAMM50Q9Y512 469 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 SCN10AQ9Y5Y9 1956 aa21.12■□□□□ 0.97
SSU72-203ENST00000378725 DCDC2CA8MYV0 355 aa21.11■□□□□ 0.97
SSU72-203ENST00000378725 BACH1O14867 736 aa21.11■□□□□ 0.97
SSU72-203ENST00000378725 CHMP2AO43633 222 aa21.11■□□□□ 0.97
SSU72-203ENST00000378725 EVI5O60447 810 aa21.11■□□□□ 0.97
SSU72-203ENST00000378725 ZSCAN22P10073 491 aaPredicted RBP21.11■□□□□ 0.97
SSU72-203ENST00000378725 HOXC8P31273 242 aa21.11■□□□□ 0.97
SSU72-203ENST00000378725 C7orf31Q8N865 590 aa21.11■□□□□ 0.97
SSU72-203ENST00000378725 PPP1R13LQ8WUF5 828 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms