RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 CFAP221Q4G0U5 840 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 GPIHBP1Q8IV16 184 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 HDAC7Q8WUI4 952 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 AIPL1Q9NZN9 384 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 STIM2Q9P246 746 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 NPHP3-ACAD11A0A0J9YXS1 232 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 GOLGA6BA6NDN3 693 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 MED24O75448 989 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 EPS15P42566 896 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 MATR3P43243 847 aaKnown RBP eCLIP20.03■□□□□ 0.88e-7■■■■□ 24.8
TDP2-202ENST00000378198 SLC12A3P55017 1021 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 NAB2Q15742 525 aa20.03■□□□□ 0.8
TDP2-202ENST00000378198 APOBEC3HQ6NTF7 200 aaKnown RBP20.03■□□□□ 0.8
TDP2-202ENST00000378198 DHX36Q9H2U1 1008 aaKnown RBP20.03■□□□□ 0.8
TDP2-202ENST00000378198 TBX3O15119 743 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 IRX5P78411 483 aaPredicted RBP20.02■□□□□ 0.8
TDP2-202ENST00000378198 CDC37Q16543 378 aaPredicted RBP20.02■□□□□ 0.8
TDP2-202ENST00000378198 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 EMBQ6PCB8 327 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 SND1Q7KZF4 910 aaKnown RBP eCLIP20.02■□□□□ 0.8
TDP2-202ENST00000378198 ERMNQ8TAM6 284 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 TBC1D5Q92609 795 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 PSMB7Q99436 277 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 STK24Q9Y6E0 443 aa20.02■□□□□ 0.8
TDP2-202ENST00000378198 CACNB1Q02641 598 aaPredicted RBP20.01■□□□□ 0.79
TDP2-202ENST00000378198 RAPGEF1Q13905 1077 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 SLFN13Q68D06 897 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 C8orf74Q6P047 294 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 RIN2Q8WYP3 895 aaPredicted RBP20.01■□□□□ 0.79
TDP2-202ENST00000378198 GANQ9H2C0 597 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 KANSL2Q9H9L4 492 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 SPATA31A6Q5VVP1 1343 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 EEF2P13639 858 aaKnown RBP20.01■□□□□ 0.79
TDP2-202ENST00000378198 KLHL30Q0D2K2 578 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 KCNH2Q12809 1159 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 ASIC2Q16515 512 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 LRRC31Q6UY01 552 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 CRYGNQ8WXF5 182 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 TRAF3IP3Q9Y228 551 aa20.01■□□□□ 0.79
TDP2-202ENST00000378198 MEIS2O14770 477 aa20■□□□□ 0.79
TDP2-202ENST00000378198 ARHGAP4P98171 946 aa20■□□□□ 0.79
TDP2-202ENST00000378198 SLC7A5Q01650 507 aa20■□□□□ 0.79
TDP2-202ENST00000378198 NFIAQ12857 509 aa20■□□□□ 0.79
TDP2-202ENST00000378198 DOK7Q18PE1 504 aa20■□□□□ 0.79
TDP2-202ENST00000378198 Q4G0T1 1027 aa20■□□□□ 0.79
TDP2-202ENST00000378198 FRMD5Q7Z6J6 570 aa20■□□□□ 0.79
TDP2-202ENST00000378198 EHD2Q9NZN4 543 aa20■□□□□ 0.79
TDP2-202ENST00000378198 NRXN2Q9P2S2 1712 aa20■□□□□ 0.79
TDP2-202ENST00000378198 GRID2IPA4D2P6 1211 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 G3V3G9 751 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 RAD21O60216 631 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 ONECUT3O60422 494 aaPredicted RBP19.99■□□□□ 0.79
TDP2-202ENST00000378198 PALMO75781 387 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 NR2F2P24468 414 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 KLRC1P26715 233 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 STAT3P40763 770 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 CRKP46108 304 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 SPIRE1Q08AE8 756 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 GIT2Q14161 759 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 C10orf76Q5T2E6 689 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 DCAF8Q5TAQ9 597 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 CATSPER3Q86XQ3 398 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 FAM76AQ8TAV0 307 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 ETNPPLQ8TBG4 499 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 CAVIN3Q969G5 261 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 ZHX3Q9H4I2 956 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 DNAJC18Q9H819 358 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 RBM12Q9NTZ6 932 aaKnown RBP19.99■□□□□ 0.79
TDP2-202ENST00000378198 SMARCAL1Q9NZC9 954 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 PCDHGC5Q9Y5F6 944 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 POTEFA5A3E0 1075 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 OPA1O60313 960 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 POTEIP0CG38 1075 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 RPA1P27694 616 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 CERKLQ49MI3 558 aaPredicted RBP19.99■□□□□ 0.79
TDP2-202ENST00000378198 MEI1Q5TIA1 1274 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 ALS2CLQ60I27 953 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 POTEGQ6S5H5 508 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 POTEEQ6S8J3 1075 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 SRLQ86TD4 932 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 SYT2Q8N9I0 419 aaPredicted RBP19.99■□□□□ 0.79
TDP2-202ENST00000378198 TRERF1Q96PN7 1200 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 UIMC1Q96RL1 719 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.99■□□□□ 0.79
TDP2-202ENST00000378198 DNM3Q9UQ16 869 aa19.99■□□□□ 0.79
TDP2-202ENST00000378198 A0A087X0T9 212 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 BTNL10A8MVZ5 291 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 GOLGA8KD6RF30 607 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 FOSP01100 380 aaPredicted RBP19.98■□□□□ 0.79
TDP2-202ENST00000378198 FAM228BP0C875 321 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 NNTQ13423 1086 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 ZFPM1Q8IX07 1006 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 FAM133AQ8N9E0 248 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 ZDHHC15Q96MV8 337 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 HINFPQ9BQA5 517 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 AMNQ9BXJ7 453 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 PLCB1Q9NQ66 1216 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms