RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TCP11X2Q5H9J9 407 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 CT47A1Q5JQC4 288 aaPredicted RBP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 REEP2Q9BRK0 252 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 AGO4Q9HCK5 861 aaKnown RBP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 SAMM50Q9Y512 469 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 DHX15O43143 795 aaKnown RBP14.02□□□□□ -0.16
CLCN6-206ENST00000376496 GJA5P36382 358 aa14.02□□□□□ -0.16
CLCN6-206ENST00000376496 CASP5P51878 434 aa14.02□□□□□ -0.16
CLCN6-206ENST00000376496 SP4Q02446 784 aa14.02□□□□□ -0.16
CLCN6-206ENST00000376496 ERO1BQ86YB8 467 aa14.02□□□□□ -0.16
CLCN6-206ENST00000376496 CYP39A1Q9NYL5 469 aa14.02□□□□□ -0.16
CLCN6-206ENST00000376496 RABGAP1Q9Y3P9 1069 aa14.02□□□□□ -0.16
CLCN6-206ENST00000376496 N4BP3O15049 544 aa14.02□□□□□ -0.17
CLCN6-206ENST00000376496 CCNE1P24864 410 aa14.02□□□□□ -0.17
CLCN6-206ENST00000376496 SETQ01105 290 aaPredicted RBP14.02□□□□□ -0.17
CLCN6-206ENST00000376496 GHRHRQ02643 423 aa14.02□□□□□ -0.17
CLCN6-206ENST00000376496 EHHADHQ08426 723 aa14.02□□□□□ -0.17
CLCN6-206ENST00000376496 FAM26FQ5R3K3 315 aa14.02□□□□□ -0.17
CLCN6-206ENST00000376496 JADE2Q9NQC1 790 aa14.02□□□□□ -0.17
CLCN6-206ENST00000376496 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.17
CLCN6-206ENST00000376496 RBBP6Q7Z6E9 1792 aaKnown RBP14.02□□□□□ -0.17
CLCN6-206ENST00000376496 USP27XA6NNY8 438 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 NR3C2P08235 984 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 COPB1P53618 953 aaKnown RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 GIT2Q14161 759 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 SYT2Q8N9I0 419 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 ZC3H15Q8WU90 426 aaKnown RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 DHTKD1Q96HY7 919 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 LXNQ9BS40 222 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 ACAD9Q9H845 621 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 SPDYE5A6NIY4 337 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 SFPQP23246 707 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 IRX3P78415 501 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 PPATQ06203 517 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 MAEAQ7L5Y9 396 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 MIER3Q7Z3K6 550 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 SFR1Q86XK3 245 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 ASCC2Q9H1I8 757 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 IKZF4Q9H2S9 585 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 IMPACTQ9P2X3 320 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 A0A0G2JLL6 359 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 ASTN1O14525 1302 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 FDX1P10109 184 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 B3GNT9Q6UX72 402 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 PRRT2Q7Z6L0 340 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 NCAPG2Q86XI2 1143 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 ZNF526Q8TF50 670 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 TXNRD2Q9NNW7 524 aa14.01□□□□□ -0.17
CLCN6-206ENST00000376496 TRMT1Q9NXH9 659 aaKnown RBP14.01□□□□□ -0.17
CLCN6-206ENST00000376496 RGS20O76081 388 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 UGCGQ16739 394 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 SPECC1LQ69YQ0 1117 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 LBX2Q6XYB7 198 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 LIMA1Q9UHB6 759 aaKnown RBP14□□□□□ -0.17
CLCN6-206ENST00000376496 FRMPD4Q14CM0 1322 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 IQCA1LA6NCM1 817 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 GRIN3BO60391 1043 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 EYA4O95677 639 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 CCNE2O96020 404 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 OAZ1P54368 228 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 SEMA3FQ13275 785 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 RINT1Q6NUQ1 792 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 CCDC65Q8IXS2 484 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 ANKRD35Q8N283 1001 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 RRAGCQ9HB90 399 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 PCDHA2Q9Y5H9 948 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 DOCK5Q9H7D0 1870 aa14□□□□□ -0.17
CLCN6-206ENST00000376496 PRKCSHP14314 528 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-206ENST00000376496 GSDMDP57764 484 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 EPHA7Q15375 998 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 VSIG10LQ86VR7 867 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 CNOT6LQ96LI5 555 aaKnown RBP13.99□□□□□ -0.17
CLCN6-206ENST00000376496 RIT2Q99578 217 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 MYBP10242 640 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 HERVK_113P62684 666 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 TBX2Q13207 712 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-206ENST00000376496 MOGSQ13724 837 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 Q3C1V9 767 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 CENPPQ6IPU0 288 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 KSR1Q8IVT5 923 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 MYOCDQ8IZQ8 938 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 TUFT1Q9NNX1 390 aa13.99□□□□□ -0.17
CLCN6-206ENST00000376496 B4DLN1 442 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 RNF225M0QZC1 329 aaPredicted RBP13.98□□□□□ -0.17
CLCN6-206ENST00000376496 ATP2A1O14983 1001 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 CYP2C8P10632 490 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 BCRP11274 1271 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 CCND2P30279 289 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 RBL2Q08999 1139 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 KCNA1Q09470 495 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 FILIP1LQ4L180 1135 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 DNTTIP2Q5QJE6 756 aaKnown RBP13.98□□□□□ -0.17
CLCN6-206ENST00000376496 ARMC9Q7Z3E5 817 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 GUF1Q8N442 669 aaKnown RBP13.98□□□□□ -0.17
CLCN6-206ENST00000376496 NSUN6Q8TEA1 469 aaKnown RBP13.98□□□□□ -0.17
CLCN6-206ENST00000376496 SCFD1Q8WVM8 642 aa13.98□□□□□ -0.17
CLCN6-206ENST00000376496 LCTP09848 1927 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms