RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 COL4A6Q14031 1691 aa26.68■■□□□ 1.86
C9orf47-202ENST00000375850 ARHGAP4P98171 946 aa26.67■■□□□ 1.86
C9orf47-202ENST00000375850 TIGD5Q53EQ6 642 aa26.67■■□□□ 1.86
C9orf47-202ENST00000375850 RSPH3Q86UC2 560 aa26.67■■□□□ 1.86
C9orf47-202ENST00000375850 TRIM50Q86XT4 487 aa26.67■■□□□ 1.86
C9orf47-202ENST00000375850 IFIH1Q9BYX4 1025 aaKnown RBP26.67■■□□□ 1.86
C9orf47-202ENST00000375850 BAZ2BQ9UIF8 2168 aaKnown RBP26.67■■□□□ 1.86
C9orf47-202ENST00000375850 SH2B2O14492 632 aaPredicted RBP26.66■■□□□ 1.86
C9orf47-202ENST00000375850 LEXMQ3ZCV2 418 aa26.66■■□□□ 1.86
C9orf47-202ENST00000375850 EPC2Q52LR7 807 aa26.66■■□□□ 1.86
C9orf47-202ENST00000375850 SEPT1Q8WYJ6 367 aa26.66■■□□□ 1.86
C9orf47-202ENST00000375850 MYL10Q9BUA6 226 aa26.66■■□□□ 1.86
C9orf47-202ENST00000375850 ERAP1Q9NZ08 941 aa26.66■■□□□ 1.86
C9orf47-202ENST00000375850 SIP14410 1827 aa26.65■■□□□ 1.86
C9orf47-202ENST00000375850 H3BNC9 293 aa26.65■■□□□ 1.86
C9orf47-202ENST00000375850 TCF7P36402 384 aaPredicted RBP26.65■■□□□ 1.86
C9orf47-202ENST00000375850 PUS10Q3MIT2 529 aaKnown RBP26.65■■□□□ 1.86
C9orf47-202ENST00000375850 SRBD1Q8N5C6 995 aaKnown RBP26.65■■□□□ 1.86
C9orf47-202ENST00000375850 EHMT1Q9H9B1 1298 aa26.65■■□□□ 1.86
C9orf47-202ENST00000375850 TCF20Q9UGU0 1960 aaKnown RBP26.65■■□□□ 1.86
C9orf47-202ENST00000375850 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.64■■□□□ 1.86
C9orf47-202ENST00000375850 SPDYE3A6NKU9 549 aa26.64■■□□□ 1.86
C9orf47-202ENST00000375850 KCNA2P16389 499 aa26.64■■□□□ 1.86
C9orf47-202ENST00000375850 SP4Q02446 784 aa26.64■■□□□ 1.86
C9orf47-202ENST00000375850 TNPO1Q92973 898 aaKnown RBP26.64■■□□□ 1.86
C9orf47-202ENST00000375850 RWDD3Q9Y3V2 267 aa26.64■■□□□ 1.86
C9orf47-202ENST00000375850 SLC12A7Q9Y666 1083 aa26.64■■□□□ 1.86
C9orf47-202ENST00000375850 MICAL3Q7RTP6 2002 aa26.63■■□□□ 1.85
C9orf47-202ENST00000375850 PLEKHA8P1O95397 391 aa26.63■■□□□ 1.85
C9orf47-202ENST00000375850 PPFIA1Q13136 1202 aa26.63■■□□□ 1.85
C9orf47-202ENST00000375850 MTMR1Q13613 665 aa26.63■■□□□ 1.85
C9orf47-202ENST00000375850 TMEM192Q8IY95 271 aa26.63■■□□□ 1.85
C9orf47-202ENST00000375850 SMARCAD1Q9H4L7 1026 aa26.63■■□□□ 1.85
C9orf47-202ENST00000375850 ARIH1Q9Y4X5 557 aaPredicted RBP26.63■■□□□ 1.85
C9orf47-202ENST00000375850 UBIAD1Q9Y5Z9 338 aa26.63■■□□□ 1.85
C9orf47-202ENST00000375850 UPP2O95045 317 aa26.62■■□□□ 1.85
C9orf47-202ENST00000375850 GPM6BQ13491 265 aa26.62■■□□□ 1.85
C9orf47-202ENST00000375850 IL17RAQ96F46 866 aa26.62■■□□□ 1.85
C9orf47-202ENST00000375850 LSG1Q9H089 658 aaKnown RBP26.62■■□□□ 1.85
C9orf47-202ENST00000375850 RB1P06400 928 aa26.61■■□□□ 1.85
C9orf47-202ENST00000375850 ITGB5P18084 799 aa26.61■■□□□ 1.85
C9orf47-202ENST00000375850 SGMS1Q86VZ5 419 aa26.61■■□□□ 1.85
C9orf47-202ENST00000375850 GLG1Q92896 1179 aa26.61■■□□□ 1.85
C9orf47-202ENST00000375850 JADE2Q9NQC1 790 aa26.61■■□□□ 1.85
C9orf47-202ENST00000375850 TUBE1Q9UJT0 475 aa26.61■■□□□ 1.85
C9orf47-202ENST00000375850 MBLAC1A4D2B0 266 aaPredicted RBP26.6■■□□□ 1.85
C9orf47-202ENST00000375850 RRN3P2A6NIE6 340 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 SLC27A2O14975 620 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 ATP9AO75110 1047 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 CHRNA1P02708 482 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 KCNA5P22460 613 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 GRIK4Q16099 956 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 TMEM31Q5JXX7 168 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 SYNE3Q6ZMZ3 975 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 FIBCD1Q8N539 461 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 FANCBQ8NB91 859 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 BANK1Q8NDB2 785 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 EPHX3Q9H6B9 360 aa26.6■■□□□ 1.85
C9orf47-202ENST00000375850 GSTTP1A0A1W2PQM5 241 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 NCK2O43639 380 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 FAM43BQ6ZT52 329 aaPredicted RBP26.59■■□□□ 1.85
C9orf47-202ENST00000375850 TMTC3Q6ZXV5 915 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 ESYT1Q9BSJ8 1104 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 LMAN2LQ9H0V9 348 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 PCDHA6Q9UN73 950 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 FAM50BQ9Y247 325 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 PCDHA8Q9Y5H6 950 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 SQORQ9Y6N5 450 aa26.59■■□□□ 1.85
C9orf47-202ENST00000375850 C5orf67F2Z3F1 127 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 GHRP10912 638 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 PLA2G5P39877 138 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 MGAT3Q09327 533 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 NECTIN1Q15223 517 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 RNF20Q5VTR2 975 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 CREB3L3Q68CJ9 461 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 NEK9Q8TD19 979 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 C11orf84Q9BUA3 381 aaPredicted RBP26.58■■□□□ 1.85
C9orf47-202ENST00000375850 OSBPL7Q9BZF2 842 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 NSUN3Q9H649 340 aaKnown RBP26.58■■□□□ 1.85
C9orf47-202ENST00000375850 HCN4Q9Y3Q4 1203 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 TELO2Q9Y4R8 837 aa26.58■■□□□ 1.85
C9orf47-202ENST00000375850 GPR37L1O60883 481 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 PPP1R18Q6NYC8 613 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 RUFY4Q6ZNE9 571 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 TSHZ1Q6ZSZ6 1077 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 FAM178BQ8IXR5 827 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 CMTR1Q8N1G2 835 aaKnown RBP26.57■■□□□ 1.84
C9orf47-202ENST00000375850 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.57■■□□□ 1.84
C9orf47-202ENST00000375850 PABPC5Q96DU9 382 aaKnown RBP26.57■■□□□ 1.84
C9orf47-202ENST00000375850 FAM122AQ96E09 287 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 LRFN3Q9BTN0 628 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 AZI2Q9H6S1 392 aa26.57■■□□□ 1.84
C9orf47-202ENST00000375850 JPH1Q9HDC5 661 aaPredicted RBP26.57■■□□□ 1.84
C9orf47-202ENST00000375850 RBM28Q9NW13 759 aaKnown RBP26.57■■□□□ 1.84
C9orf47-202ENST00000375850 PI4K2BG5E9Z4 385 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 FOSP01100 380 aaPredicted RBP26.56■■□□□ 1.84
C9orf47-202ENST00000375850 RXRAP19793 462 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 LPIN1Q14693 890 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 COL19A1Q14993 1142 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 UBE2SQ16763 222 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms