RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.38□□□□□ -0.119e-7■■■■■ 77.9
CUL4A-203ENST00000375441 TMOD2Q9NZR1 351 aa14.38□□□□□ -0.11
CUL4A-203ENST00000375441 SAMD15Q9P1V8 674 aa14.38□□□□□ -0.11
CUL4A-203ENST00000375441 CYTH3O43739 400 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 KLRC1P26715 233 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 GRB10Q13322 594 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 PKD2L1Q9P0L9 805 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
CUL4A-203ENST00000375441 ATP8A1Q9Y2Q0 1164 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 C5P01031 1676 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 HMGB1P1B2RPK0 211 aaPredicted RBP14.37□□□□□ -0.11
CUL4A-203ENST00000375441 KIF4AO95239 1232 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 DHX9Q08211 1270 aaKnown RBP14.37□□□□□ -0.11
CUL4A-203ENST00000375441 PROCA1Q8NCQ7 364 aaPredicted RBP14.37□□□□□ -0.11
CUL4A-203ENST00000375441 DDX47Q9H0S4 455 aaKnown RBP14.37□□□□□ -0.11
CUL4A-203ENST00000375441 CD209Q9NNX6 404 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 SPOPO43791 374 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 NPY5RQ15761 445 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 MARCH10Q8NA82 808 aaPredicted RBP14.37□□□□□ -0.11
CUL4A-203ENST00000375441 NSRP1Q9H0G5 558 aaKnown RBP14.37□□□□□ -0.11
CUL4A-203ENST00000375441 EHMT1Q9H9B1 1298 aa14.37□□□□□ -0.11
CUL4A-203ENST00000375441 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 NPHP3-ACAD11A0A0J9YXS1 232 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 AARSP49588 968 aaKnown RBP eCLIP14.36□□□□□ -0.11
CUL4A-203ENST00000375441 CDK17Q00537 523 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 ORC2Q13416 577 aaPredicted RBP14.36□□□□□ -0.11
CUL4A-203ENST00000375441 PDIA5Q14554 519 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 PPP1R7Q15435 360 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 SLC18A3Q16572 532 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 SEL1L2Q5TEA6 688 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 CREG2Q8IUH2 290 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 GCNT4Q9P109 453 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 ARFGEF2Q9Y6D5 1785 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 DCCP43146 1447 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 TULP2O00295 520 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 EZRP15311 586 aaKnown RBP14.36□□□□□ -0.11
CUL4A-203ENST00000375441 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 ZBTB21Q9ULJ3 1066 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 SLC37A4O43826 429 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 CFBP00751 764 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 GKAP1Q5VSY0 366 aaPredicted RBP14.36□□□□□ -0.11
CUL4A-203ENST00000375441 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 MSL3Q8N5Y2 521 aaKnown RBP14.36□□□□□ -0.11
CUL4A-203ENST00000375441 ZNF622Q969S3 477 aaKnown RBP eCLIP14.36□□□□□ -0.117e-6■■■■□ 22.7
CUL4A-203ENST00000375441 GOLPH3Q9H4A6 298 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 KCNK9Q9NPC2 374 aa14.36□□□□□ -0.11
CUL4A-203ENST00000375441 NID2Q14112 1375 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 USP17L10C9JJH3 530 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 ADAMTS3O15072 1205 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 STAT3P40763 770 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 UBL4BQ8N7F7 174 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 MTMR8Q96EF0 704 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 PLVAPQ9BX97 442 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 EHD4Q9H223 541 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 SFI1A8K8P3 1242 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 NEFHP12036 1026 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 ACTN1P12814 892 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 PRLRP16471 622 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 C10orf76Q5T2E6 689 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 POTEEQ6S8J3 1075 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 ATP6V1G3Q96LB4 118 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 STMN4Q9H169 189 aaPredicted RBP14.35□□□□□ -0.11
CUL4A-203ENST00000375441 TAF1DQ9H5J8 278 aaPredicted RBP14.35□□□□□ -0.11
CUL4A-203ENST00000375441 N4BP2Q86UW6 1770 aaPredicted RBP14.35□□□□□ -0.11
CUL4A-203ENST00000375441 KIF1AQ12756 1690 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 RPS6KA4O75676 772 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 GBP2P32456 591 aaPredicted RBP14.35□□□□□ -0.11
CUL4A-203ENST00000375441 SEPT7Q16181 437 aaKnown RBP14.35□□□□□ -0.11
CUL4A-203ENST00000375441 TTBK2Q6IQ55 1244 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 RUBCNQ92622 972 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 RABGAP1Q9Y3P9 1069 aa14.35□□□□□ -0.11
CUL4A-203ENST00000375441 EPHB6O15197 1021 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 RGS16O15492 202 aaPredicted RBP14.34□□□□□ -0.11
CUL4A-203ENST00000375441 AKR1B1P15121 316 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 FERP16591 822 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 CUL1Q13616 776 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 DOK7Q18PE1 504 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 FBXW10Q5XX13 1052 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 CCDC105Q8IYK2 499 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 ADGRF4Q8IZF3 695 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 ANO3Q9BYT9 981 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 BHMT2Q9H2M3 363 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 A0A087X0T9 212 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 GRID2IPA4D2P6 1211 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 FAM228BP0C875 321 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 HOXA7P31268 230 aaPredicted RBP14.34□□□□□ -0.11
CUL4A-203ENST00000375441 MAP2K2P36507 400 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 FMNL3Q8IVF7 1028 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 FAM186BQ8IYM0 893 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 PAIP2Q9BPZ3 127 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms