RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NAA25Q14CX7 972 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 CNGA3Q16281 694 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 SPATS2Q86XZ4 545 aaKnown RBP9.96□□□□□ -0.82
UBR4-201ENST00000375218 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 V9GY48 417 aaPredicted RBP9.96□□□□□ -0.82
UBR4-201ENST00000375218 FSD2A1L4K1 749 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 ALG1L2C9J202 215 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 ZNF254O75437 659 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 CTSHP09668 335 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 PRLRP16471 622 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 UBXN1Q04323 297 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 BBS9Q3SYG4 887 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 ANKK1Q8NFD2 765 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 RUFY2Q8WXA3 655 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 MTUS1Q9ULD2 1270 aa9.96□□□□□ -0.82
UBR4-201ENST00000375218 USP34Q70CQ2 3546 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 ZSCAN9O15535 394 aaPredicted RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 THAP12O43422 761 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 TUFMP49411 452 aaKnown RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 MRPS5P82675 430 aaKnown RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 LPCAT2Q7L5N7 544 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 PXYLP1Q8TE99 480 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 COPRSQ9NQ92 184 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 STK39Q9UEW8 545 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 SOS1Q07889 1333 aaPredicted RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 ZBTB39O15060 712 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 XPAP23025 273 aaPredicted RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 DNAJB1P25685 340 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 DAB2P98082 770 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 PDE12Q6L8Q7 609 aaKnown RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 SDF4Q9BRK5 362 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 NTPCRQ9BSD7 190 aaKnown RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 APOL5Q9BWW9 433 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 LMCD1Q9NZU5 365 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 NPTX2P47972 431 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 CTDSPL2Q05D32 466 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 NCOA4Q13772 614 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 CBX2Q14781 532 aaPredicted RBP9.95□□□□□ -0.82
UBR4-201ENST00000375218 HEATR4Q86WZ0 1026 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 THNSL2Q86YJ6 484 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 CCDC148Q8NFR7 591 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 COG1Q8WTW3 980 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 CCDC113Q9H0I3 377 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 HCN4Q9Y3Q4 1203 aa9.95□□□□□ -0.82
UBR4-201ENST00000375218 NCAM2O15394 837 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 CLCN6P51797 869 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
UBR4-201ENST00000375218 C21orf58P58505 322 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 GBE1Q04446 702 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 LAMB3Q13751 1172 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 POSTNQ15063 836 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 NEK5Q6P3R8 708 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 KDELC1Q6UW63 502 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 NOC3LQ8WTT2 800 aaKnown RBP9.94□□□□□ -0.82
UBR4-201ENST00000375218 SCG3Q8WXD2 468 aaKnown RBP9.94□□□□□ -0.82
UBR4-201ENST00000375218 TBC1D22BQ9NU19 505 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 MCM9Q9NXL9 1143 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 ADAMTS1Q9UHI8 967 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 EFR3BQ9Y2G0 817 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 SPEF2Q9C093 1822 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 LRRC10BA6NIK2 292 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 STAT3P40763 770 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 SIK1P57059 783 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 PPP2R5DQ14738 602 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 MMEL1Q495T6 779 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 BNC2Q6ZN30 1099 aaPredicted RBP9.94□□□□□ -0.82
UBR4-201ENST00000375218 NANOGNBQ7Z5D8 188 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 AMIGO3Q86WK7 504 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 ZNF454Q8N9F8 522 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 CHCHD6Q9BRQ6 235 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 RHOBTB2Q9BYZ6 727 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 SPATS2LQ9NUQ6 558 aaKnown RBP9.94□□□□□ -0.82
UBR4-201ENST00000375218 EVCP57679 992 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 MEI1Q5TIA1 1274 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 SLFN12Q8IYM2 578 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 NAP1L3Q99457 506 aaPredicted RBP9.94□□□□□ -0.82
UBR4-201ENST00000375218 SYNCQ9H7C4 482 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 QPCTLQ9NXS2 382 aa9.94□□□□□ -0.82
UBR4-201ENST00000375218 BTAF1O14981 1849 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 RRN3P2A6NIE6 340 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 SIN3BO75182 1162 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 DDHD2O94830 711 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 APOA4P06727 396 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 CD9P21926 228 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 NFIAQ12857 509 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 ARHGAP29Q52LW3 1261 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 RNF20Q5VTR2 975 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
UBR4-201ENST00000375218 DGLUCYQ7Z3D6 616 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 STRA8Q7Z7C7 330 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 SIRPGQ9P1W8 387 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 RIPK2O43353 540 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 SERPINC1P01008 464 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 CNTFP26441 200 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms