RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 NOC2LQ9Y3T9 749 aaKnown RBP23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 CPSF3Q9UKF6 684 aaKnown RBP23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 hCG_1984214I3L0E3 225 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 TOM1L1O75674 476 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 ZNF713Q8N859 430 aaPredicted RBP23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 GDAP1Q8TB36 358 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 ZNF526Q8TF50 670 aaPredicted RBP23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 THAP9Q9H5L6 903 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 PIH1D3Q9NQM4 214 aaKnown RBP23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 HEXIM2Q96MH2 286 aaKnown RBP23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 AP1M1Q9BXS5 423 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 MRPL46Q9H2W6 279 aaKnown RBP23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 LRRC4Q9HBW1 653 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 VGLL3A8MV65 326 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 SERPING1P05155 500 aa23.94■■□□□ 1.42
TM9SF3-201ENST00000371142 PHLPP2Q6ZVD8 1323 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 SRGAP2CP0DJJ0 459 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 MXI1P50539 228 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 SRPRBQ9Y5M8 271 aaKnown RBP23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 SLC7A5Q01650 507 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 PPWD1Q96BP3 646 aaKnown RBP23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 SLC12A6Q9UHW9 1150 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 PPP1R9AQ9ULJ8 1098 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 LRRD1A4D1F6 860 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 GNGT2O14610 69 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 BBOX1O75936 387 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 PSAPP07602 524 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 SUPT20HL1Q3ZLR7 823 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 EXOC8Q8IYI6 725 aa23.93■■□□□ 1.42
TM9SF3-201ENST00000371142 WDR91A4D1P6 747 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 PRPSAP2O60256 369 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 MT-ND3P03897 115 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 STMN1P16949 149 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 FAM133BQ5BKY9 247 aaKnown RBP23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 PBKQ96KB5 322 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 TLK1Q9UKI8 766 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 EIF2AK2P19525 551 aaKnown RBP23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 MYO1EQ12965 1108 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 SIX6OS1Q8N1H7 587 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.92■■□□□ 1.424e-7■■□□□ 12.5
TM9SF3-201ENST00000371142 PI4KBQ9UBF8 816 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 G3BP2Q9UN86 482 aaKnown RBP23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 FAM81BQ96LP2 452 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 RCOR1Q9UKL0 485 aa23.92■■□□□ 1.42
TM9SF3-201ENST00000371142 SFI1A8K8P3 1242 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 CCNE1P24864 410 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 GOLGA8QA0A0J9YX86 632 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 GOLGA8OA6NCC3 632 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 GOLGA8NF8WBI6 632 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 IFNAR1P17181 557 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 TRIM42Q8IWZ5 723 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 CDHR1Q96JP9 859 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 NVLO15381 856 aaKnown RBP23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 CYP27A1Q02318 531 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 PTPN12Q05209 780 aaKnown RBP23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 HP1BP3Q5SSJ5 553 aaPredicted RBP23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 KIAA1841Q6NSI8 718 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 DEPDC1BQ8WUY9 529 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 DHX36Q9H2U1 1008 aaKnown RBP23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 RPSAP08865 295 aaKnown RBP23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 CDK8P49336 464 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 C10orf76Q5T2E6 689 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 TSPYL2Q9H2G4 693 aaPredicted RBP23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 ZWILCHQ9H900 591 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 PLEKHA8P1O95397 391 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 MYL1P05976 194 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 SPOPLQ6IQ16 392 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 PDXDC2PQ6P474 469 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 HSPH1Q92598 858 aa23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 DNAJC17Q9NVM6 304 aaKnown RBP23.91■■□□□ 1.42
TM9SF3-201ENST00000371142 IGSF1Q8N6C5 1336 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 CDO1Q16878 200 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 CTNND1O60716 968 aaKnown RBP23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 PHEXP78562 749 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 RASIP1Q5U651 963 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 ARHGEF25Q86VW2 580 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 VSTM4Q8IW00 320 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 ENOX1Q8TC92 643 aaKnown RBP23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 SRP68Q9UHB9 627 aaKnown RBP23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 INPP1P49441 399 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 CXorf38Q8TB03 319 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 TCP11Q8WWU5 503 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 TRPC5Q9UL62 973 aaPredicted RBP23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 ZFYVE16Q7Z3T8 1539 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 ZBED6P86452 979 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 RESTQ13127 1097 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 TMC4Q7Z404 712 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 NLRP4Q96MN2 994 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 GCC2Q8IWJ2 1684 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 ZNF233A6NK53 670 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 PSMD2Q13200 908 aa23.9■■□□□ 1.42
TM9SF3-201ENST00000371142 NDUFA10O95299 355 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 RASGRF1Q13972 1273 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 PCGF5Q86SE9 256 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 EPS15L1Q9UBC2 864 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 TMEM94Q12767 1356 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 PNMA6FA0A0J9YX94 578 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 MYCP01106 439 aaPredicted RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms