RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 BFSP2Q13515 415 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 PTGISQ16647 500 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 PRR16Q569H4 304 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 CAGE1Q8TC20 777 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 SMARCAD1Q9H4L7 1026 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 AZI2Q9H6S1 392 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 TRMT13Q9NUP7 481 aaKnown RBP21.01■□□□□ 0.95
CHTOP-202ENST00000368687 ERAP1Q9NZ08 941 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 KCNJ14Q9UNX9 436 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 CYP3A7-CYP3A51PA0A087WV96 503 aa21■□□□□ 0.95
CHTOP-202ENST00000368687 CYP3A7P24462 503 aa21■□□□□ 0.95
CHTOP-202ENST00000368687 SLC26A2P50443 739 aa21■□□□□ 0.95
CHTOP-202ENST00000368687 SAFBQ15424 915 aaKnown RBP eCLIP21■□□□□ 0.95
CHTOP-202ENST00000368687 LRCH3Q96II8 777 aa21■□□□□ 0.95
CHTOP-202ENST00000368687 NOC4LQ9BVI4 516 aaKnown RBP21■□□□□ 0.95
CHTOP-202ENST00000368687 PKD2L1Q9P0L9 805 aa21■□□□□ 0.95
CHTOP-202ENST00000368687 ADAMTS3O15072 1205 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 JAK2O60674 1132 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 MMP1P03956 469 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 ITGB8P26012 769 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 ACTR2P61160 394 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 KRT76Q01546 638 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 ST3GAL1Q11201 340 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 ITGB3BPQ13352 177 aaPredicted RBP20.99■□□□□ 0.95
CHTOP-202ENST00000368687 Q4G0T1 1027 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 ZNF746Q6NUN9 644 aaPredicted RBP20.99■□□□□ 0.95
CHTOP-202ENST00000368687 NEK8Q86SG6 692 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 SMAP1Q8IYB5 467 aaPredicted RBP20.99■□□□□ 0.95
CHTOP-202ENST00000368687 FAM184AQ8NB25 1140 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 GLG1Q92896 1179 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 BCAS3Q9H6U6 928 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 HDAC6Q9UBN7 1215 aa20.99■□□□□ 0.95
CHTOP-202ENST00000368687 LGR5O75473 907 aa20.98■□□□□ 0.95
CHTOP-202ENST00000368687 PARNO95453 639 aaKnown RBP20.98■□□□□ 0.95
CHTOP-202ENST00000368687 PFKMP08237 780 aa20.98■□□□□ 0.95
CHTOP-202ENST00000368687 UTP14CQ5TAP6 766 aaKnown RBP20.98■□□□□ 0.95
CHTOP-202ENST00000368687 GDF6Q6KF10 455 aaPredicted RBP20.98■□□□□ 0.95
CHTOP-202ENST00000368687 RETREG2Q8NC44 543 aa20.98■□□□□ 0.95
CHTOP-202ENST00000368687 RIT2Q99578 217 aa20.98■□□□□ 0.95
CHTOP-202ENST00000368687 PPP1R12CQ9BZL4 782 aa20.98■□□□□ 0.95
CHTOP-202ENST00000368687 TANC1Q9C0D5 1861 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 GSTTP1A0A1W2PQM5 241 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 C17orf102A2RUQ5 167 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 HOXC8P31273 242 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 RFC2P35250 354 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 RBL2Q08999 1139 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 PTK7Q13308 1070 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 FAM160B1Q5W0V3 765 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 PPP4R3AQ6IN85 833 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 MIS18BP1Q6P0N0 1132 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 PLPPR4Q7Z2D5 763 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 AFAP1L1Q8TED9 768 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 LENG9Q96B70 501 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 C8orf76Q96K31 380 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 NRCAMQ92823 1304 aa20.97■□□□□ 0.95
CHTOP-202ENST00000368687 MYH9P35579 1960 aaKnown RBP20.96■□□□□ 0.95
CHTOP-202ENST00000368687 ATG7O95352 703 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 RPLP2P05387 115 aaKnown RBP20.96■□□□□ 0.95
CHTOP-202ENST00000368687 SMIM10L2AP0DMW4 78 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 SMIM10L2BP0DMW5 78 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 INF2Q27J81 1249 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 LRIT3Q3SXY7 679 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 KRT40Q6A162 431 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 PSRC1Q6PGN9 363 aaPredicted RBP20.96■□□□□ 0.95
CHTOP-202ENST00000368687 PIK3AP1Q6ZUJ8 805 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 RPUSD2Q8IZ73 545 aaKnown RBP20.96■□□□□ 0.95
CHTOP-202ENST00000368687 MBOAT7Q96N66 472 aa20.96■□□□□ 0.95
CHTOP-202ENST00000368687 DHX15O43143 795 aaKnown RBP20.95■□□□□ 0.94
CHTOP-202ENST00000368687 GAS7O60861 476 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 CAND2O75155 1236 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 CYP2C9P11712 490 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 SFNP31947 248 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 CYP2C18P33260 490 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 STAT5BP51692 787 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 TRIM50Q86XT4 487 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 DIS3L2Q8IYB7 885 aaKnown RBP20.95■□□□□ 0.94
CHTOP-202ENST00000368687 RDM1Q8NG50 284 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 TMX3Q96JJ7 454 aa20.95■□□□□ 0.94
CHTOP-202ENST00000368687 MTIF3Q9H2K0 278 aaKnown RBP20.95■□□□□ 0.94
CHTOP-202ENST00000368687 DDX25Q9UHL0 483 aaKnown RBP20.95■□□□□ 0.94
CHTOP-202ENST00000368687 TRIP12Q14669 1992 aaPredicted RBP20.94■□□□□ 0.94
CHTOP-202ENST00000368687 WDR64B1ANS9 1081 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 TBX3O15119 743 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 MSH4O15457 936 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 JAK3P52333 1124 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 LETM2Q2VYF4 491 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 LRCH2Q5VUJ6 765 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 SERINC5Q86VE9 423 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 SLC5A5Q92911 643 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 ATP6V0A1Q93050 837 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 FAM20AQ96MK3 541 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 TEKT3Q9BXF9 490 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 IL23AQ9NPF7 189 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 GJB4Q9NTQ9 266 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 PCDHA10Q9Y5I2 948 aa20.94■□□□□ 0.94
CHTOP-202ENST00000368687 IGKV6D-21A0A0A0MT36 114 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 RRN3P2A6NIE6 340 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 DDX39AO00148 427 aaKnown RBP20.93■□□□□ 0.94
CHTOP-202ENST00000368687 BACH1O14867 736 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 PSAPP07602 524 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms