RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.61■■□□□ 1.05
CKS1B-203ENST00000368439 CPLX1O14810 134 aa21.61■■□□□ 1.05
CKS1B-203ENST00000368439 DEXIO95424 95 aa21.61■■□□□ 1.05
CKS1B-203ENST00000368439 PFKMP08237 780 aa21.61■■□□□ 1.05
CKS1B-203ENST00000368439 RFC2P35250 354 aa21.61■■□□□ 1.05
CKS1B-203ENST00000368439 OTOP2Q7RTS6 562 aa21.61■■□□□ 1.05
CKS1B-203ENST00000368439 SERINC5Q86VE9 423 aa21.61■■□□□ 1.05
CKS1B-203ENST00000368439 AIFM3Q96NN9 605 aa21.61■■□□□ 1.05
CKS1B-203ENST00000368439 CDH23Q9H251 3354 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 C17orf102A2RUQ5 167 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 CKBP12277 381 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 ADAM17P78536 824 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 NPY5RQ15761 445 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 DEFB128Q7Z7B8 93 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 CCDC155Q8N6L0 562 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 BICD2Q8TD16 824 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 PCYT2Q99447 389 aa21.6■■□□□ 1.05
CKS1B-203ENST00000368439 SLKQ9H2G2 1235 aaPredicted RBP21.6■■□□□ 1.05
CKS1B-203ENST00000368439 JPH1Q9HDC5 661 aaPredicted RBP21.6■■□□□ 1.05
CKS1B-203ENST00000368439 GRXCR1A8MXD5 290 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 M0R2N6 131 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 LGR5O75473 907 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 CTDNEP1O95476 244 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 SELPP16109 830 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 ANKRD1Q15327 319 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 LRRC8DQ7L1W4 858 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 SLC9A2Q9UBY0 812 aa21.59■■□□□ 1.05
CKS1B-203ENST00000368439 ZNF215Q9UL58 517 aaPredicted RBP21.59■■□□□ 1.05
CKS1B-203ENST00000368439 EMSYQ7Z589 1322 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 COL6A3P12111 3177 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 DHX15O43143 795 aaKnown RBP21.58■■□□□ 1.05
CKS1B-203ENST00000368439 TREHO43280 583 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 LARGE1O95461 756 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 CIITAP33076 1130 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 ZNF76P36508 570 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 NLRP5P59047 1200 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 CPLX2Q6PUV4 134 aaKnown RBP21.58■■□□□ 1.05
CKS1B-203ENST00000368439 PLA2G4DQ86XP0 818 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 TTYH1Q9H313 450 aaPredicted RBP21.58■■□□□ 1.05
CKS1B-203ENST00000368439 SETD4Q9NVD3 440 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 PCDHA4Q9UN74 947 aa21.58■■□□□ 1.05
CKS1B-203ENST00000368439 PTPRSQ13332 1948 aa21.58■■□□□ 1.04
CKS1B-203ENST00000368439 STK36Q9NRP7 1315 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 WDR81Q562E7 1941 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 RBAK-RBAKDNI3L0D1 243 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 NBNO60934 754 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 DTNBO60941 627 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 ATG7O95352 703 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 ACTR2P61160 394 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 MBTPS1Q14703 1052 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 ME3Q16798 604 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 ZNF618Q5T7W0 954 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 FAM177A1Q8N128 213 aaPredicted RBP21.57■■□□□ 1.04
CKS1B-203ENST00000368439 DAGLBQ8NCG7 672 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 LMBR1Q8WVP7 490 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 ATP6V0A1Q93050 837 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 LENG9Q96B70 501 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 GUCD1Q96NT3 240 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 SDF4Q9BRK5 362 aa21.57■■□□□ 1.04
CKS1B-203ENST00000368439 CDKL5O76039 1030 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 CCNE2O96020 404 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 CXCL10P02778 98 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 PBX2P40425 430 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 NEK4P51957 841 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 ZNF697Q5TEC3 545 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 PBX4Q9BYU1 374 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 MTIF3Q9H2K0 278 aaKnown RBP21.56■■□□□ 1.04
CKS1B-203ENST00000368439 SEMA6BQ9H3T3 888 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 SMARCAD1Q9H4L7 1026 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 ERAP1Q9NZ08 941 aa21.56■■□□□ 1.04
CKS1B-203ENST00000368439 IGKV6D-21A0A0A0MT36 114 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 PARNO95453 639 aaKnown RBP21.55■■□□□ 1.04
CKS1B-203ENST00000368439 DNAJB2P25686 324 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 TCTN1Q2MV58 587 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 BLIDQ8IZY5 108 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 NECAB1Q8N987 351 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 GTF3C6Q969F1 213 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 FAM161BQ96MY7 647 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 NRCAMQ92823 1304 aa21.55■■□□□ 1.04
CKS1B-203ENST00000368439 TMEM265A0A087WTH1 108 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 FDPSP14324 419 aaKnown RBP21.54■■□□□ 1.04
CKS1B-203ENST00000368439 SETQ01105 290 aaPredicted RBP21.54■■□□□ 1.04
CKS1B-203ENST00000368439 ABHD15Q6UXT9 468 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 GLG1Q92896 1179 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 UIMC1Q96RL1 719 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 KIF2CQ99661 725 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 PHF20Q9BVI0 1012 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 SLC4A7Q9Y6M7 1214 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 SIP14410 1827 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 CHD9Q3L8U1 2897 aa21.54■■□□□ 1.04
CKS1B-203ENST00000368439 DDX39AO00148 427 aaKnown RBP21.53■■□□□ 1.04
CKS1B-203ENST00000368439 IPO5O00410 1097 aaKnown RBP21.53■■□□□ 1.04
CKS1B-203ENST00000368439 GNAT1P11488 350 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 MARK3P27448 753 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 THPOP40225 353 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 USP11P51784 963 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 ST3GAL1Q11201 340 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 PRR16Q569H4 304 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 MARCH8Q5T0T0 291 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 GALNT17Q6IS24 598 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms