RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 DEFB128Q7Z7B8 93 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 EMID1Q96A84 441 aaPredicted RBP16.71■□□□□ 0.27
SF3B5-201ENST00000367569 GPRASP2Q96D09 838 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 MXRA8Q9BRK3 442 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
SF3B5-201ENST00000367569 PRDM6Q9NQX0 595 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 WDR81Q562E7 1941 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 ZBBXA8MT70 800 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 FAM86B1E9PN63 330 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 FOSP01100 380 aaPredicted RBP16.7■□□□□ 0.26
SF3B5-201ENST00000367569 LGALS2P05162 132 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 FAM86B2P0C5J1 330 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
SF3B5-201ENST00000367569 MYOGP15173 224 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 GNA11P29992 359 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 PSEN2P49810 448 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 PTPN11Q06124 597 aaPredicted RBP16.7■□□□□ 0.26
SF3B5-201ENST00000367569 MFSD10Q14728 455 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 NPY5RQ15761 445 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 XRRA1Q6P2D8 792 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 KCNV1Q6PIU1 500 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 OXER1Q8TDS5 423 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 GAS2L1Q99501 681 aaPredicted RBP16.7■□□□□ 0.26
SF3B5-201ENST00000367569 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 KCNH7Q9NS40 1196 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 PCDHA4Q9UN74 947 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 TET1Q8NFU7 2136 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 CHD7Q9P2D1 2997 aa16.7■□□□□ 0.26
SF3B5-201ENST00000367569 FAM205CA6NFA0 338 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 F2P00734 622 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 TGFB3P10600 412 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 GUCY1B3Q02153 619 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 ITGB3BPQ13352 177 aaPredicted RBP16.69■□□□□ 0.26
SF3B5-201ENST00000367569 NEDD9Q14511 834 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 KIAA0753Q2KHM9 967 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 CEP55Q53EZ4 464 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 METTL7BQ6UX53 244 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 PLA2G4DQ86XP0 818 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 BLIDQ8IZY5 108 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 PPM1EQ8WY54 764 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 GJA10Q969M2 543 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 GPR20Q99678 358 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 SLC28A3Q9HAS3 691 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
SF3B5-201ENST00000367569 IGLV3-22A0A075B6J6 115 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 PFKMP08237 780 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 IQCF3P0C7M6 154 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 MARK3P27448 753 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 TCF7P36402 384 aaPredicted RBP16.68■□□□□ 0.26
SF3B5-201ENST00000367569 ZNF200P98182 395 aaPredicted RBP16.68■□□□□ 0.26
SF3B5-201ENST00000367569 PRR16Q569H4 304 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 GDF6Q6KF10 455 aaPredicted RBP16.68■□□□□ 0.26
SF3B5-201ENST00000367569 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 CRYGNQ8WXF5 182 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 CTAGE1Q96RT6 745 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 AGO4Q9HCK5 861 aaKnown RBP16.68■□□□□ 0.26
SF3B5-201ENST00000367569 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 HDAC6Q9UBN7 1215 aa16.68■□□□□ 0.26
SF3B5-201ENST00000367569 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 TDP2O95551 362 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 HOXD8P13378 290 aaPredicted RBP16.67■□□□□ 0.26
SF3B5-201ENST00000367569 ATP2A2P16615 1042 aaKnown RBP16.67■□□□□ 0.26
SF3B5-201ENST00000367569 RFC2P35250 354 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 HIC1Q14526 733 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 RABEP1Q15276 862 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 PTGISQ16647 500 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 RETREG2Q8NC44 543 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 TBCKQ8TEA7 893 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 C16orf70Q9BSU1 422 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 JPH1Q9HDC5 661 aaPredicted RBP16.67■□□□□ 0.26
SF3B5-201ENST00000367569 NOD1Q9Y239 953 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 PCDHA11Q9Y5I1 949 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 SIP14410 1827 aa16.67■□□□□ 0.26
SF3B5-201ENST00000367569 EDIL3O43854 480 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 IGFBP4P22692 258 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 NR5A1Q13285 461 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 BFSP2Q13515 415 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 CCDC85BQ15834 202 aaPredicted RBP16.66■□□□□ 0.26
SF3B5-201ENST00000367569 INF2Q27J81 1249 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 EARS2Q5JPH6 523 aaKnown RBP16.66■□□□□ 0.26
SF3B5-201ENST00000367569 PPP2R2DQ66LE6 453 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 C7orf31Q8N865 590 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 DAGLBQ8NCG7 672 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 CDHR1Q96JP9 859 aa16.66■□□□□ 0.26
SF3B5-201ENST00000367569 KAT6AQ92794 2004 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 MUC3AQ02505 3323 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 GSTTP1A0A1W2PQM5 241 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 M0R2N6 131 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 HAS3O00219 553 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 MEIS1O00470 390 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 ACTN1P12814 892 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 SESTD1Q86VW0 696 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 WNT8BQ93098 351 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 SENP7Q9BQF6 1050 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 KATNAL1Q9BW62 490 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 1577.3 ms