RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 RAB25P57735 213 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MTX1Q13505 466 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 NCOA7Q8NI08 942 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 BRF1Q92994 677 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CDK12Q9NYV4 1490 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PRKAA2P54646 552 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 FSCBQ5H9T9 825 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 NFU1Q9UMS0 254 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 RBM43Q6ZSC3 357 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 UHMK1Q8TAS1 419 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TNFRSF25Q93038 417 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 UPF3AQ9H1J1 476 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ADCY1Q08828 1119 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ZBTB11O95625 1053 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 STX3Q13277 289 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 Q4G0T1 1027 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 BTNL9Q6UXG8 535 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 DHX32Q7L7V1 743 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TMX3Q96JJ7 454 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TSPAN18Q96SJ8 248 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TAP1Q03518 808 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MUM1Q2TAK8 710 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 FIGNQ5HY92 759 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 FAXDC2Q96IV6 333 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 GHRP10912 638 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CDKL2Q92772 493 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC134Q9H6E4 229 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ST7Q9NRC1 585 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 EHD2Q9NZN4 543 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CNOT7Q9UIV1 285 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TLK1Q9UKI8 766 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TOPBP1Q92547 1522 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PDHBP11177 359 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ATP5JP18859 108 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 FAM92BQ6ZTR7 304 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MAP3K14Q99558 947 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ZBTB12Q9Y330 459 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MYCNP04198 464 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC166P0CW27 439 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF394Q53GI3 561 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 SLC10A4Q96EP9 437 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PGM2Q96G03 612 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TYW5A2RUC4 315 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 GDF11O95390 407 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 P4HA1P13674 534 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MAGEA8P43361 318 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 DDI2Q5TDH0 399 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 RHOT2Q8IXI1 618 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PAGR1Q9BTK6 254 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 IQGAP2Q13576 1575 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CFAP69A5D8W1 941 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PSMD14O00487 310 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ANGPT2O15123 496 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 KRT37O76014 449 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 WFS1O76024 890 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CORO7P57737 925 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MED21Q13503 144 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 SNX1Q13596 522 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TAB3Q8N5C8 712 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PITPNM2Q9BZ72 1349 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ARMCX4Q5H9R4 360 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 WDR35Q9P2L0 1181 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ESR2Q92731 530 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TRMT2AQ8IZ69 625 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 VPS16Q9H269 839 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 AP1M2Q9Y6Q5 423 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 FANCAO15360 1455 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 COL17A1Q9UMD9 1497 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 NDUFS2O75306 463 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ATP2B3Q16720 1220 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 BEND3Q5T5X7 828 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 SNX19Q92543 992 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 EIF3HO15372 352 aaKnown RBP eCLIP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CDK18Q07002 472 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MRPL48Q96GC5 212 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 MFHAS1Q9Y4C4 1052 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ABCC4O15439 1325 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 WNT7AO00755 349 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 FSBPO95073 299 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 RFX4Q33E94 735 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 FAM83BQ5T0W9 1011 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 HDGFL1Q5TGJ6 251 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CEP126Q9P2H0 1117 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TRAF3IP3Q9Y228 551 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 KPNA3O00505 521 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 TRIM27P14373 513 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 RAD51AP2Q09MP3 1159 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF654Q8IZM8 581 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 LINS1Q8NG48 757 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 CLMNQ96JQ2 1002 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ANTXR1Q9H6X2 564 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 NHEJ1Q9H9Q4 299 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 SLC12A7Q9Y666 1083 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PRAG1Q86YV5 1406 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 IL15P40933 162 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PARP9Q8IXQ6 854 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 HIC2Q96JB3 615 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 UBA7P41226 1012 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 ITGA1P56199 1179 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms